Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0176 ATGAAAGCACATATGAAGATTGGGATTTGCATTGGAAATTCTGGTAAGAGGAACACCATTTTGCAAAACCAAGGTGAAGAATATGTCCCAGAAGCAGAAACACTCCTATTTGCAGAACAACTCAATTATCTCATTGTTAACATGGATATACATATTCAGGTTGTGAAAGGTGGCGAAAAAGGCAAAAGATACCACAAACATGAGAGAAAAGAACAAGACACAGAAAACAGGCTTAAAGAAGGAAACTACAAAGGTGAATATGCACTTCATGTGGAGAAAGATGGCAAGAAAACAAAAGCTTCCCTTAACCATGAGAGTATACAAAAAAGGGCAAACAAATCTGATACAGACACTGCCAATGTGTTTAAGAATCATAGAGATGTTTTGGGGGTAGTTAAAGTGGAGAAGGATTTACTGCTTAAATTTCTAAGAGAATTAGATGCTGAAGGGAAAAACCTTCATCAAGCTTCTGACACCAAAGCAAGATTGACAAAATCAGGGTCATTTCCTTTAAGCTCATCTTCACAAATGAGAAGCATTACTCCTACTAGTACCTTGCAACACAAGAAAACCGAAGTGTGGGCCACTCCCAAAGAAGAAAGGTTGCTTGATAGTACTCAAACAACAAAACCAGTGCCTTTAGTGAGTGATCATGGCGTGCTTAGTGCCGGAGAACAAAAAACAGGCAATTCTCTGCTGCCATCTCATGGATTGAATCATAAAGGTTGGAACCAAGTTGTCATTCATCGTTTCAGAGTTATAAAGCATAAGATAAAACATACTCTTTTGGAGTTCAGAAAAAATGGTCACCACAGAGATTCATCTCAATATAGCAGCATCACTAATGATGAGAAAGAGGTGCAAAGCTTAGATGAAGGTGTGGTTCGAGAGTACATAAGGAGCAAAAGCTTAAAGGAGACTAAATCTTCTGATTATGCTTCCAACAGACAGGAAGCACAACGAGTTGTAAGAAGAACATCGTCTCTGAACGAATCGATGGATAAATATACTCAGTTGTTTGAGAAAAGCTTCAACTCAGATGTCAAGTGGCACAGTTCAAAGTCCAAAAGCTTAAGATTGACAAATGAGGATAAGAATACAAGTGACCATGCTTCTAGATTTTCCAGAAGCAATTTTTCACTGCCTAATATTGAGGCTTTAGGCTTCATTGTACACGAGGCACTTCTTGATATGAATGATAAAACAGATACTGAGGAGCCTGATAATAATGCTGACAGAAAACTGGTGGGACTTCCTTCAAAGAAAGATAAATCAATTGATCATGTTGAAGAGACTGAAATCACAGAAACAGCTAAAGCTGGCAGTGGAGATATGAATCCAAGTCCCTTATCTAATGATCAGGTTGAAGACAAAATTGATGCAGCAGTTACCAGTGAGAAAGTGGAAGATAAATATGAACATGAGTCAGCTAGGGGAGATGGAATTTTTCCTCAAGAAAAAGAAGAAATAGGTATGGCTATCCATGAAACTAAAAGTGAAGCAGATGCAACCCACCATACAGAAGGTAAAGAATTGGATATTCAAGGATCTAGCATGGATGGATTGAAGACTGATGAGTTACCAATTAAAGAAAGTATATATTCTTCCCCGAGCTCGTTATCAAATGCAAATGATAATACAGAAAATGTCACAAACAAGAGCCCTGAGAAGATTTTCCTTGACACAGGCAATGATTCCAATTTCAGATACGTGAAGGCCATTCTCCAATTTTCAGGTTTAATGGAAAATGAACATAGTCTAACGAGGCATACTATAGACCAGCGACTAAAGCCTTCTTTGATCATGGAAATGGAATCCTCTGTAGAGGAGAATACCAAAGCCTATGATCAACAGCTTCTTTTCAACCTAGTTGATGAGGTACTTATTGATATATATGAGAGGTCATCGAATCACTTCCCAAGGCCCTTCGCCTTCAACTACCTCCTCCATCCTGTGCCGAAAGGAGACTATCTTCTTAATGAAGTATGGTCCAGTGTTAAATCATACCTGAGCTTGAGGCCAGAGCTAGATCAGACATTAGACGATGTTGTGAGACGTGACTTGGCAAGAAGAAGTAGCTGGATGAACCTCCAGCAAGAAGAGGAGCAAGTTGCAATTGAACTAGAGGACATGATTATGGATGATTTATTAGATGAACTCGTCTTCTCATGA 2172 0.3886 MKAHMKIGICIGNSGKRNTILQNQGEEYVPEAETLLFAEQLNYLIVNMDIHIQVVKGGEKGKRYHKHERKEQDTENRLKEGNYKGEYALHVEKDGKKTKASLNHESIQKRANKSDTDTANVFKNHRDVLGVVKVEKDLLLKFLRELDAEGKNLHQASDTKARLTKSGSFPLSSSSQMRSITPTSTLQHKKTEVWATPKEERLLDSTQTTKPVPLVSDHGVLSAGEQKTGNSLLPSHGLNHKGWNQVVIHRFRVIKHKIKHTLLEFRKNGHHRDSSQYSSITNDEKEVQSLDEGVVREYIRSKSLKETKSSDYASNRQEAQRVVRRTSSLNESMDKYTQLFEKSFNSDVKWHSSKSKSLRLTNEDKNTSDHASRFSRSNFSLPNIEALGFIVHEALLDMNDKTDTEEPDNNADRKLVGLPSKKDKSIDHVEETEITETAKAGSGDMNPSPLSNDQVEDKIDAAVTSEKVEDKYEHESARGDGIFPQEKEEIGMAIHETKSEADATHHTEGKELDIQGSSMDGLKTDELPIKESIYSSPSSLSNANDNTENVTNKSPEKIFLDTGNDSNFRYVKAILQFSGLMENEHSLTRHTIDQRLKPSLIMEMESSVEENTKAYDQQLLFNLVDEVLIDIYERSSNHFPRPFAFNYLLHPVPKGDYLLNEVWSSVKSYLSLRPELDQTLDDVVRRDLARRSSWMNLQQEEEQVAIELEDMIMDDLLDELVFS* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0176 723 MobiDBLite consensus disorder prediction 306 325 - -
Amo18g0176 723 MobiDBLite consensus disorder prediction 157 192 - -
Amo18g0176 723 MobiDBLite consensus disorder prediction 355 371 - -
Amo18g0176 723 MobiDBLite consensus disorder prediction 355 375 - -
Amo18g0176 723 PANTHER PROTEIN TRM32 75 723 IPR044257 -
Amo18g0176 723 MobiDBLite consensus disorder prediction 159 191 - -
Amo18g0176 723 Pfam Domain of unknown function (DUF4378) 568 719 IPR025486 -
Amo18g0176 723 MobiDBLite consensus disorder prediction 269 288 - -
Amo18g0176 723 PANTHER PROTEIN TRM32 75 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0176 Amo-Chr18 2598377 2600837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0176 537 721 TRM (TON1 Recruiting Motif) Superfamily AT1G07620 36.364 2.48e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0176 - - ahf:112772681 1270.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0176 18 2598377 2600837 Amo18g0176 18 2598377 2600837 ECH