Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0164 ATGGCTGATCCAAGCCATGGTGGAAATCCGGCCACCGATTTCACAACTAGTAGGGAGGAAAATCCAGCTCCCTTTGATGAGAGTGATTTCTCTGCTGCAGCCCTAAAGTACATAGATGAAATGCTGATGGAAGAAGACATCGATGAAGAGTACAACATGTTCCAACATTCCTCGGCTCTCCTAGCAGCTGAGAAATCACTTTATGATGCCATTGGCCAGAGGTATCCTTCTTCTGCCTCTACTTTGTGGTCTTCAACTTCTTCTTCTATCCAGCATCATAATTACTACCCCAATGTGGAGAGCCCTGGGGATAGTTATAGCAGTACTAGTTCTGGCAGCACTTGTGGCACCACCAATACTAGCAGCTCTGCTGACTACTTCTGGAGCGGTTTTGATCTTTCTATGATTCCATTGATGCCAAACACTTTACCTTTTCCTGATACCTTTAATTTTCAGTCCAATCCATCCTCCACCACCCCCCAATCTAACCACAGAAGCGACTTCACTGCCACAAACAATAGAAGCAGTAGCAAGCAATCAGCATTGTACATGGATGACACTGAGCTATCCGAATTTTTTGATAAGGTACTTATTGGAGCTGGATTGGGAAGAGGGTCATCCCAAGCTGATGAAGGCATTCCCAAAGATTCTCGCGGTAAGAAGAGCCGTGCAAGGAAAAGAAATGACAAAAATGACGACGAAGTTATTGATCTGAGGTCATTGTTGATGCAATGTGCACAAGCAGTTTCTTCTGATAACCGTCCAATGGCAAAAGAGTTATTGATGCAGATTAAGCTGCATTCTTCTCCAACAGGTGATGCAACTCAGAGATTGTCCCATTGCTTTGTAAATGCTCTGGAAGCACGCATGGCAGGGACAGGTACACACATTCATAGTGCCTTATCCACAAAAAGGCCCTCTGCTTCTGATATGGTCAAGGCCTACAAAATGTTTACATTAGCTTGTCCATTTGACAAGTTTGGAATCAGGTTCTCAGTCAACTCAATTGGCGATTTGGCCATGGAAGGTGTCCAAACTCTTCACATTGTCGAATTTGGCATCCGCTATGGCTTCAAGTGGCCTGGACTTATGTATCGCCTATCCAGACTCCCCAGTGGGCCTCCGAAGCTTCGCATAACCGGGATAGAGTATCCACTGCCTGGTTTGAAGCTTGAGCAAACAGGGCAATGCTTAGCAAGGTATTGCGAGCGATTCAACATCCCTTTCGAGTTCAATGCTATTGTTGCAAAGAAATGGGAGAGAATCAAAGTTGAGGATCTCAAGATAAGGGAGAATGAGTTTGTAGCTGTGAATTGCATGTTTAGATTTGAGAATCTGCATGATGAGACAGTTGTGTTGGAGAATCCTAGAGATTCTGTTTTGGAGTTAATAAGGAAGGCTAATCCGAACATATTTGTACATGGCATTATAAATGGTAACTATGATGCTGCATTCTTCGTGACAAGGTTTAAGGAGGCAATGTTTCATTACTCAGCAATGTTTGACATGCTTGATAACACTGTTGCCCGTGATGATCCTATAAGGTTGATGTATGAGGAAGCTATATTTGGGAAGGAAGTGATGAATGTTGTGGCTTGTGAAGGGAATGAGAGGATTGAGAGACCACACAATTACAAGAAATGGCAGGTAAGGAACACAAGAGCAGGGTTCAGGCAGCTTTCATTGGATGAACAAATGATTGAGAAGTTTAAGGATATGTTGAGAAATGAAGGTTATCATAGAGATTTCATGCTTCATGCTGATGGCAAATGGCTTCTACAAGGTTGGAAGGGCAGAATCCTATATGCTTCTTCTTGTTGGGTACCAGCATAG 1833 0.4343 MADPSHGGNPATDFTTSREENPAPFDESDFSAAALKYIDEMLMEEDIDEEYNMFQHSSALLAAEKSLYDAIGQRYPSSASTLWSSTSSSIQHHNYYPNVESPGDSYSSTSSGSTCGTTNTSSSADYFWSGFDLSMIPLMPNTLPFPDTFNFQSNPSSTTPQSNHRSDFTATNNRSSSKQSALYMDDTELSEFFDKVLIGAGLGRGSSQADEGIPKDSRGKKSRARKRNDKNDDEVIDLRSLLMQCAQAVSSDNRPMAKELLMQIKLHSSPTGDATQRLSHCFVNALEARMAGTGTHIHSALSTKRPSASDMVKAYKMFTLACPFDKFGIRFSVNSIGDLAMEGVQTLHIVEFGIRYGFKWPGLMYRLSRLPSGPPKLRITGIEYPLPGLKLEQTGQCLARYCERFNIPFEFNAIVAKKWERIKVEDLKIRENEFVAVNCMFRFENLHDETVVLENPRDSVLELIRKANPNIFVHGIINGNYDAAFFVTRFKEAMFHYSAMFDMLDNTVARDDPIRLMYEEAIFGKEVMNVVACEGNERIERPHNYKKWQVRNTRAGFRQLSLDEQMIEKFKDMLRNEGYHRDFMLHADGKWLLQGWKGRILYASSCWVPA* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0164 610 ProSiteProfiles GRAS family profile. 229 608 IPR005202 -
Amo18g0164 610 Pfam GRAS domain family 238 607 IPR005202 -
Amo18g0164 610 MobiDBLite consensus disorder prediction 1 26 - -
Amo18g0164 610 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 159 609 IPR005202 -
Amo18g0164 610 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 87 IPR005202 -
Amo18g0164 610 PANTHER SCARECROW-LIKE PROTEIN 14 159 609 - -
Amo18g0164 610 PANTHER SCARECROW-LIKE PROTEIN 14 20 87 - -
Amo18g0164 610 MobiDBLite consensus disorder prediction 147 179 - -
Amo18g0164 610 MobiDBLite consensus disorder prediction 204 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0164 Amo-Chr18 2512743 2514683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0164 27 609 GRAS Transcription Factor Family AT2G29060 44.316 9.31e-177 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo18g0164 GRAS 2.1e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0164 - - aip:107614541 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0164 18 2512743 2514683 Amo18g0164 18 2512743 2514683 ECH
Amo14g2408 14 97223042 97226500 Amo18g0164 18 2512743 2514683 ECH