Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0163 ATGGATCCAAACCGCGTTAGGAACACCGATTACATAAACGCCTACGGATTCGGCGACTATGGTGGTGCTTTGCTTTCAGATTTCAACGATTGGGATCTACACAGACAATACAATCACCCTTTCGATTTAACTCCAAGTAATGCTTTTGATCGGTTTGACGCCGACACATTTGGCTTGCATGCACATGCGGTTTCGAATTCCGGAAGCTCGGAGCCGTTTGTTCCACCCTCTTCCGCGAGCCGTGTGGAAAAATCCATGCCGGGTTCAGCTTTTGGGGCTGTGGCTTCTATGCCGGATCCTTCCGTGGAAGACACGGACTTTTCTGAAACGGTGAGGTACATAAGCCAGATTTTGTTGGAAGAGAATTTTGAGGATAAGCCTTGCATGTGCTATAATCCTCTTAGCCTGCAAGATACTGAGAAATCGTTCTATGATGCCCTCAATCAAGAATTTCCCCTTTCCCCTAATGAGCACCCTCTTGATATTCATCAGAATCTGGAGAGTCCTGATGGTGTTAGTGCTGGAAGCTTCCCCACTGGTTCTTCTGGAGGTTGCAGCAATAGCAACAGCAGTAGCACTAGCAATAGCAGTAGTGAGAACCATTTAAGTTCTCATGACTTCAAGACCCTTTCTCCAGATACTCCTGTTTCCGGTGATAGTTCTTTGCAGTTTGATTCACATTCGCATTTGATTTCGCATGTGCCTTCTCAGCTTCACCTTCCTCAACATGCTTTGACTAGTATTGGTGATGGGGTGTTTGATTTGGATCCTTCTGCAACGAAGCTCTTGGCTCAGAATATCTTTAGTAATGCTGACTCTATCTTGCAGTTCAAAAGAGGGTTGGAGGAAGCCAGTAAATTTCTTCCCCCTGGGCCAAGGCTTTCCACTGGCCTGGAGAGCAGTAGCATGCATGCAGAAGAGTCAAAGAGAAGGGTGGAGAAGGCTGCAGTGCCAGTGATGGTGGAGAATGATGCTAAGGAGAGATCAAACAGAGTTGTTGCTGGGCCATATCACATAGTTCCAGCAACAACAAAAGCTGCAAAAAATACAGCAGCGAGGAGTCTGGATGGGGTGAAGAGTAGGAAGCATCATGCTCGCCAGGGCGATGATGGTGAAGAAGAAAGATGCAACAAGCAATCTGCGGTTAGTGTTGAGGAGGAAAGTGAAATATCTGAAATGTTTGACAAGGTGCTGCTTAGTGTTGAAAATGTCCCACTGTCTGCTGAACAGCAGGGTGGATTGGTTGTGGATACACAACTAATTGAACAACCACATTCATCCGAGGGAGGGAGGAGTCGATCCAAGAAAAAAGGCAGGAAGAAAGAAACTGTGGATTTGAGAACTCTTTTGGTTCTGTGTGCCCAAGCTGTGTCTGCCAATGACCAAAGGACTGCTAATGAACTACTAAAGCAGATCAGACAGCATTCCTTGCCCTTTGGCGATGCATATCAGAGGCTGGCTCGTTACTTTGCCGATGGCCTGGAGGCACGCATGGCTGGCACTGGCCCTGGAATTCATATATTCTATGCCTCTCTCAGCTACAAGAAGTTCAGTGCTGCTGATTTTCTCAAGGCCTACCAAGTTTTTATATCTGCTTGCCCTTTCAAGAAATTTGCACATTTCTTTTCAAATAAGATGATTTTGAACATAGCTGAAAAGGCAGAAACTCTTCATATTGTTGATTTCGGTATCCTGTATGGTTTCCAGTGGCCAATACTTATCAAATTTCTAGCCAAGAGAGATGGAGGGCCTCCCAAGCTGCGGATCACAGGAATTGAGTATCCCCAAGCTGGATTTCGTCCCACAGAAAGAATTGAGGAGAGTGGACGTCGTCTAGCTAAATATTGCAAGCTTTTCAATGTTCCCTTTGAGTACAAAGCCATAGCATCAAGACACTGGGAAACCATTCAGATTGAAGACCTTAACATCAAGGACAATGAGGTAGTTGCTGTGAACTGTCTGGTAAGGTTCAAGAATTTACTCGAGGAGACGGTTGAAGTGAACAGTCCTAGAAATGCAGTTTTGAATTTAATCAGGAGGATAAACCCAGCTATTTTTGCTCACACAGTCGTAAATGGTTCTTATAATGCCCCTTTCTTCCTCACACGCTTTCGGGAAGCACTGTTCCATTATTCTGCAATTTACGATATGTTTGATACTCTCATACCCCGAAACAATGCATGGAGGTCGATGCTTGAGAGAGAGTTTTTGGGTCGGGAGATCATGAATGTTGTAGCATGTGAAGGTCTAGAAAGGGTTGAGAGGCCTGAAACATACAAGCAGTGGCAGGCTAGGAATTCAAGAGCTGGTTTTAGGCAGCTACCACTGGATAAGGCTTTAATGGCCAAATTTAGGAGCAAGTTAAAGGAATGGTACCAACACCACAAAGATTTTGTTTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGGATTTTGTATGCTTCCTCTTGTTGGGTGCCAGCATGA 2478 0.452 MDPNRVRNTDYINAYGFGDYGGALLSDFNDWDLHRQYNHPFDLTPSNAFDRFDADTFGLHAHAVSNSGSSEPFVPPSSASRVEKSMPGSAFGAVASMPDPSVEDTDFSETVRYISQILLEENFEDKPCMCYNPLSLQDTEKSFYDALNQEFPLSPNEHPLDIHQNLESPDGVSAGSFPTGSSGGCSNSNSSSTSNSSSENHLSSHDFKTLSPDTPVSGDSSLQFDSHSHLISHVPSQLHLPQHALTSIGDGVFDLDPSATKLLAQNIFSNADSILQFKRGLEEASKFLPPGPRLSTGLESSSMHAEESKRRVEKAAVPVMVENDAKERSNRVVAGPYHIVPATTKAAKNTAARSLDGVKSRKHHARQGDDGEEERCNKQSAVSVEEESEISEMFDKVLLSVENVPLSAEQQGGLVVDTQLIEQPHSSEGGRSRSKKKGRKKETVDLRTLLVLCAQAVSANDQRTANELLKQIRQHSLPFGDAYQRLARYFADGLEARMAGTGPGIHIFYASLSYKKFSAADFLKAYQVFISACPFKKFAHFFSNKMILNIAEKAETLHIVDFGILYGFQWPILIKFLAKRDGGPPKLRITGIEYPQAGFRPTERIEESGRRLAKYCKLFNVPFEYKAIASRHWETIQIEDLNIKDNEVVAVNCLVRFKNLLEETVEVNSPRNAVLNLIRRINPAIFAHTVVNGSYNAPFFLTRFREALFHYSAIYDMFDTLIPRNNAWRSMLEREFLGREIMNVVACEGLERVERPETYKQWQARNSRAGFRQLPLDKALMAKFRSKLKEWYQHHKDFVFDEDNNWMLQGWKGRILYASSCWVPA* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0163 825 MobiDBLite consensus disorder prediction 169 221 - -
Amo18g0163 825 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 73 824 IPR005202 -
Amo18g0163 825 MobiDBLite consensus disorder prediction 355 382 - -
Amo18g0163 825 MobiDBLite consensus disorder prediction 288 311 - -
Amo18g0163 825 MobiDBLite consensus disorder prediction 421 441 - -
Amo18g0163 825 MobiDBLite consensus disorder prediction 346 384 - -
Amo18g0163 825 MobiDBLite consensus disorder prediction 154 221 - -
Amo18g0163 825 Pfam GRAS domain family 446 822 IPR005202 -
Amo18g0163 825 ProSiteProfiles GRAS family profile. 437 823 IPR005202 -
Amo18g0163 825 PANTHER SCARECROW-LIKE PROTEIN 34 73 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0163 Amo-Chr18 2490949 2494408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0163 110 825 GRAS Transcription Factor Family AT1G07530 47.868 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo18g0163 GRAS 2.1e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0163 - - aip:107612146 1594.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0163 18 2490949 2494408 Amo18g0163 18 2490949 2494408 ECH