Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0162 ATGCTTTCTACCAATCCTTATCTAGAAAATTTCCCTGGTCATCTGCAACCAATAATGAATGGTTTTCATTCATCATCTTCATCTTCTTCCGGAACCATCTCAAGTGGAGATTCCACTGAGTCTAGTAAATATTCCAATAACATCCTCAGATACATAAGTGACATCCTCATGGACGAGGAAGATGACTTGGAGAACAAACCCTGTATGTTGCAACAGTGTTTGAGGCTCCAAGCTGCTGAAAAATCATTCTCTGAGGTGCTTGGAAATTCATCAAATTCTCCACCATCTCAAGGCTGCGATGAAAGCAACCAAGATGGTGATTACTGTCGCAGCACAAGCTTCGAAAGCTATAGCAGCTTTAACACTGATAATAGCTCTTATGAGTTTGATTGGGTCAATCTTGTTGGCGAGTATGAATCTTCTTTGCTACAAGCCTCTCTTCTTGGTGGATCTTATGGAACTCACTACCAGAACATGGTTCCATTGATCAACAATGAAGAAGGATCTAGTCCTGGAACAAGGGAAAAGAGAAGCTATCAGGTTGATGATGACGCTTCATATGAACAAGGCCGAAGAGGAAACAAGATCTCAGCTACTGTTTTCTCCGACGAGTCAGAACCACCGGAGATTCTTTATGAAGTGCTGCGTATCCCGTATGGAAGAAGTAAAAAATATTGTTGTGTTGAGCCGTTATCAAAAAATGACATGCTGAAGATGCAGAATGTTGGATCCAATTCCAAGACAGGACGTTCAAAGAACAGAAACAGCAACACAGATGCAACTGTGGATTTATGGACTCTGCTAACTCAATGTGCACAAGCAGTGGCAGACTATGATAAGAGGAATGCATACGATACACTCAAGCAGATTAGGCAGCATTCTTCACCGTCCGGCGATGGACTCCAGCGTATGGCGCATTACTTCGCCATTGGCCTCGAGACACGGTTGAATGCCGGAACACCGTCATATCCTCCCCTTGATATGGCTTCTGCTGCAGATATGTTGAAAGCTTACAAACTCTACGTTACAGCTTCGCCTTTGCAGTGGATGACAAATAAATTGGCAACCCAAACAATCAAGAACCTGGTTCAGAATGAAAGCCGCGTTCACATTATTGACTTTGGAATTAGCTATGGTTTCCAGTGGCCCTGCCTTATCAAGTATATGTCAGAGAGAAACGGGGCTATAAAGCTTCGTATAACCGGAATTGATCTTCCTCAGCCGGGTTTCCGGCCGACGGAAAGGGTCGAGGAGACCGGAAGACGGTTGGAGACTTTGTGTAAGAGGTACAAGGTGCCTTTCGAATACAACTGCATTGCACAGAAATGGGAAACAATTAGGGTTGAGGATCTTAAGATAGATAGGGATGAAGTGACCGTTGTTAACTGCTTCTACAGGCTGAAAAACCTGCCTGATGAAACTGTGTCAGTGAACAGTCCAAGAGATGCAGTGCTGAAGCTGATGAGGAGGATTAATCCAAAGATCTTCCTGCATGGGGTAGTCAATGGCTCTTATAGTGCACCGTTTTTCCCGACTCGGTTCAGGGAGGCTCTGTTCCACTTCTCATCACAGTTTAATATGTTTGAAGCTAATTGCCCCCGCGAAGATGCAGAAAGGATGATGCTTGAGAAAGGGATGATTGGAAGGGATGCTATCAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGAGCTACAAGCGATGGCAGATTAGGAACAAGAGAGCAGGATTCAAGCAAATTCGGGTGGATCAGGAATTGGTGAATGAAATCAAGGGAATGGTGAAGAATGAGTATCATAGAGATTTTGTGGTTGACCAGGATGGCAACTGGGTTTTGCATGGCTGGAAAGGTCGTATTTTTCATGCTCTCTCTGTTTGGGTTCCTGCATAA 1902 0.4427 MLSTNPYLENFPGHLQPIMNGFHSSSSSSSGTISSGDSTESSKYSNNILRYISDILMDEEDDLENKPCMLQQCLRLQAAEKSFSEVLGNSSNSPPSQGCDESNQDGDYCRSTSFESYSSFNTDNSSYEFDWVNLVGEYESSLLQASLLGGSYGTHYQNMVPLINNEEGSSPGTREKRSYQVDDDASYEQGRRGNKISATVFSDESEPPEILYEVLRIPYGRSKKYCCVEPLSKNDMLKMQNVGSNSKTGRSKNRNSNTDATVDLWTLLTQCAQAVADYDKRNAYDTLKQIRQHSSPSGDGLQRMAHYFAIGLETRLNAGTPSYPPLDMASAADMLKAYKLYVTASPLQWMTNKLATQTIKNLVQNESRVHIIDFGISYGFQWPCLIKYMSERNGAIKLRITGIDLPQPGFRPTERVEETGRRLETLCKRYKVPFEYNCIAQKWETIRVEDLKIDRDEVTVVNCFYRLKNLPDETVSVNSPRDAVLKLMRRINPKIFLHGVVNGSYSAPFFPTRFREALFHFSSQFNMFEANCPREDAERMMLEKGMIGRDAINVIACEGAERVERPESYKRWQIRNKRAGFKQIRVDQELVNEIKGMVKNEYHRDFVVDQDGNWVLHGWKGRIFHALSVWVPA* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0162 633 MobiDBLite consensus disorder prediction 85 105 - -
Amo18g0162 633 ProSiteProfiles GRAS family profile. 255 631 IPR005202 -
Amo18g0162 633 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 12 632 - -
Amo18g0162 633 MobiDBLite consensus disorder prediction 162 193 - -
Amo18g0162 633 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 632 IPR005202 -
Amo18g0162 633 MobiDBLite consensus disorder prediction 170 190 - -
Amo18g0162 633 Pfam GRAS domain family 266 630 IPR005202 -
Amo18g0162 633 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0162 Amo-Chr18 2484741 2486642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0162 38 632 GRAS Transcription Factor Family AT2G29060 43.408 2.10e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo18g0162 GRAS 7.5e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0162 - - aip:107612146 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0162 18 2484741 2486642 Amo18g0162 18 2484741 2486642 ECH