Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0154 ATAGTTGAATGCGGACGGGTGCTGAAGTGGACGTATGCATATGGATATTACTTGCCTGAGCATGAACATGCTAAAAAACAGTTTTTTGAGTACTTGCAAGGTTTTATTCTCAACCTGAATTTAATTAGGAGCAGCTTCCTTAATACTGATGGCCCATCTAAAGAATTCAATGACTTCCGCACAAAACTAGCTGGATTAACCAGTGTAACTAGAAACTACTTTGAGAATTTGGTTAGGGCTTTAGAGAATGGTTTATCTGATGTGGATAGTAATGGAGCTGCTTCAAGCAAAGCGACAAGCTCTAAAAATGCAGCAGGGAGCAGCAAGGGGAGAGGTGGAAGAGGAAAGGGAACTCTTCGGGCAAGC 366 0.4208 IVECGRVLKWTYAYGYYLPEHEHAKKQFFEYLQGFILNLNLIRSSFLNTDGPSKEFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDSNGAASSKATSSKNAAGSSKGRGGRGKGTLRAS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0154 122 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 1 98 IPR031127 GO:0004842|GO:0016567
Amo18g0154 122 Gene3D - 1 89 - -
Amo18g0154 122 MobiDBLite consensus disorder prediction 86 122 - -
Amo18g0154 122 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 1 98 - -
Amo18g0154 122 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0154 Amo-Chr18 2442282 2442864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0154 1 120 C3H Transcription Factor Family AT2G31510 66.923 5.06e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0154 K11968 - gmx:100810427 160.999