Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0130 ATGGCTAGAAACACGGCAGTAACTTTCCGGTTTCTGTGTATGTGCGAAATGTACATAAACCGCGACCCTTTTCGCTTCCCCATCTCCATCTGCTTGCTCTGCATCACCATGCATCACTATATCCCTGACATTAGTCCCATTGCATTACTTGATTCTCCCATTATGCCCCCAATTCTCAGGTCAAGAAAGATGGTGGAAAGATCTCATGATGGCCAAATAACAGAAATTATCTATAAGGGTACTCATAACCATTCAAAACCACATCTTGGTCGTCGAGCGTCAGGACTTTCCACTGATGAGATGTCAGACATGGGTGAAGCACTGAAACTGGTTGAAAAAAATGTTCAACCAGGAGCAAAAGACACATATACATAA 375 0.4293 MARNTAVTFRFLCMCEMYINRDPFRFPISICLLCITMHHYIPDISPIALLDSPIMPPILRSRKMVERSHDGQITEIIYKGTHNHSKPHLGRRASGLSTDEMSDMGEALKLVEKNVQPGAKDTYT* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0130 124 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 62 109 - -
Amo18g0130 124 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 109 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0130 Amo-Chr18 2228645 2229450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0130 62 95 WRKY Transcription Factor Family AT4G26640 73.529 1.10e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo18g0130 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0130 K18835 - gmx:100800211 85.1149