Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0123 ATGAATGGTTTTCACTGTGAGAGTTCATCATATTCACCTGGAACCAGTTCAAGTGAAGATTCTGCTGAGTATAATAAATATTCCAACCCCATCCTCAGATACATAAGTGACATCCTCATGGAGGAGGAAGATGACTTGGAGAACAAACCCTGTATGTTGCAGCAGTGTTTGAAGCTCCAAGCTGCTGAAAAATCATTCTCTGAAGTGCTTGGAAATTCATCAAATTCTRTACCCTCTCAAGGCTGTGATGAAAACAACCGAGATGGTGATTATGGTCGGACCACCAGCTTCGAGAGCTATAGCAGCTGCACCACTGATAATAACTCTTATGAGTCTGATTGGGTCAATCTTGTTGGTGAATATGAATCTTCTTTGCTACAAGCCCCTGATAATGACTCTTATGAGTCAGATTGGCTCAATCTTCTTGACTCCCCAAATGATGGATCTTCTGAAATTCACTACCAGAACATGGTACTACTGACAAACAATGAAGAGGGATCTCGATCTGGAACAACAGGAACAAGGGAAAAGAGAAGTATTCAGGTTGATGATGATACTTCTTATGAACAAGGTCGAAGAGGAAGCAAGATCTCAGCTGTTTTCTCTGATGAGTCAGAGCCACCAGAGATTCTTGATGAAGTGCTGCGTGTTCAGATTGGAAGAAGTCAATGTTTATCTGGTGTTGAACCCTTACCAGAGAATGAGATRYYGAAGAGGCAGAATGTTGACTCAGTTGGATCCAGTGGAAAGACGGCAAGATCRAAGAAAGGAAGCAGCAGAAATAGCAACACAGGTGCMACTGTGGATTTATGGAGTCTGCTAACTCRGTGTGCACAAGCAGTGGCAAACTATGATCAGAGGAATGCATATGATACACTCAAGCAGATTAGGCAACATTCTTCACCAGCTGGGGATGGAATGCAGCGTATGGCGCATTACTTCGCCATTGGCCTTGAGACACGGTTGAATGCCGGAACACCTTCATATCTTCCCCTTGATATGGCATCTGCTGCTGATATGTTGAAAGCTCACAAACTATATGTGACAGCTTCTCCTTTGCAGAGGATGACAAATACATTTGCAACCCAAACAATCATGAACCTAGTACAGAATGAAAGCTGTGTTCACATTATTGACTTTGGAATTTGCTATGGTTTCCAGTGGCCCTGCCTTATCAAGCGTCTGTCRCAGAGAAATGYGCCTATAAAGCTTCGTATAACCGGAATTGATCTTCCTCAGCCGGGWTTCCGGCCGGCAGAAAGGCTCGAGGAGACTGGTAGACGCCTGGAGAATTACTGTAAGAGGCACAATGTGCCTTTCGAATACAACTGCATTGCACAGAAATGGGAAACAATCAGGCTTGAGGATCTTAAAATAGACAGGAATGAAGTGACAGTGGTTAACTGCTTTTACAGGCTGAAAAACCTGCCGGATGAAACTGTGTTAGTAAACAGTCCAAGAGATGCAGTGTTGAAGCTGATCAGGAGCATTAATCCAAACATCTTCCTGCATGGGGTAGTCAATGGCTCTTATAGCGCGCCGTTTTTCCTGACACGGTTCAGGGAGGCYCTCTTCCACTTCTCGTCACAATTTGATATGTTTGAGGCTAATGTCCCCCGCGAAGATGTAGAAAGGATGATACTTGAGAAAGGGTTGATTGGAAGGGATGCTATCAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGACCTACAAGCAATGGCAGATTAGGAACAAGAGAGCAGGCTTCAAGCAAATTCGGGTGGATCAGGAATTGGTGAATGAAATCAAGGGAATGTTGAAGAAAGAGTATCATAGAGATTTTGTGGTTGACCAGGATGGCAAGTGGGTTTTGCAGGGCTGGAAAGGCCGTATTCTTCATGCTCTCTCTGCTTGGGTTCCTGCTTAA 1920 0.4401 MNGFHCESSSYSPGTSSSEDSAEYNKYSNPILRYISDILMEEEDDLENKPCMLQQCLKLQAAEKSFSEVLGNSSNSXPSQGCDENNRDGDYGRTTSFESYSSCTTDNNSYESDWVNLVGEYESSLLQAPDNDSYESDWLNLLDSPNDGSSEIHYQNMVLLTNNEEGSRSGTTGTREKRSIQVDDDTSYEQGRRGSKISAVFSDESEPPEILDEVLRVQIGRSQCLSGVEPLPENEXXKRQNVDSVGSSGKTARSKKGSSRNSNTGATVDLWSLLTXCAQAVANYDQRNAYDTLKQIRQHSSPAGDGMQRMAHYFAIGLETRLNAGTPSYLPLDMASAADMLKAHKLYVTASPLQRMTNTFATQTIMNLVQNESCVHIIDFGICYGFQWPCLIKRLSQRNXPIKLRITGIDLPQPGFRPAERLEETGRRLENYCKRHNVPFEYNCIAQKWETIRLEDLKIDRNEVTVVNCFYRLKNLPDETVLVNSPRDAVLKLIRSINPNIFLHGVVNGSYSAPFFLTRFREALFHFSSQFDMFEANVPREDVERMILEKGLIGRDAINVIACEGAERVERPETYKQWQIRNKRAGFKQIRVDQELVNEIKGMLKKEYHRDFVVDQDGKWVLQGWKGRILHALSAWVPA* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0123 639 MobiDBLite consensus disorder prediction 177 191 - -
Amo18g0123 639 MobiDBLite consensus disorder prediction 162 205 - -
Amo18g0123 639 ProSiteProfiles GRAS family profile. 261 637 IPR005202 -
Amo18g0123 639 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 2 638 - -
Amo18g0123 639 MobiDBLite consensus disorder prediction 69 83 - -
Amo18g0123 639 MobiDBLite consensus disorder prediction 162 176 - -
Amo18g0123 639 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 638 IPR005202 -
Amo18g0123 639 MobiDBLite consensus disorder prediction 69 102 - -
Amo18g0123 639 Pfam GRAS domain family 272 636 IPR005202 -
Amo18g0123 639 MobiDBLite consensus disorder prediction 227 262 - -
Amo18g0123 639 MobiDBLite consensus disorder prediction 240 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0123 Amo-Chr18 2177034 2180524 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0123 31 71 GRAS Transcription Factor Family AT1G07530 60.976 9.01e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo18g0123 GRAS 2.6e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0123 - - aip:107612146 1283.86