Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0121 ATGGATCCAAACCGCGTTAGGAACACCGATTACATAAACGCCTACGGATTCGGCGACKATGGTGGTGCTTTGCTTTCAGATTTCAAYGATTGGGATCTACACMGACAATAYAATCACCCTTTCGATTTAACTCCAAGTAATGCTTTTGATCGGTTTGACGCCGACACATTTGGCTTGCATGCACATGCGGTTTCGAATTCCGGAAGCTCGGAGCCGTTTGTTCCACCCTCTTCCGCGAGCCGTGTGGAAAAATCCATGCCGGGTTCAGCTTTTGGGGCTGTGGCTTCTATGCCGGATCCTTCCGTGGAAGACACGGACTTTTCTGAAACGGTGAGGTACATAAGCCAGATTTTGTTGGAAGAGAATTTTGAGGATAAGCCTTGCATGTGCTATAATCCTCTTAGCCTGCAAGATACTGAGAAATCGTTCTATGATGCCCTCAATCAAGAATTTCCCCTTTCCCCTAATGAGCACCCTCTTGATATTCATCAGAATCTGGAGAGTCCTGATGGTGTTAGTGCTGGAAGCTTCCCCACTGGTTCTTCTGGAGGTTGCAGCAATAGCAACAGCAGTAGCACTAGCAMTAGCAGTAGTGAGAACCATTTAAGTTCTCATGACTTCAAGACCCTTTCTCCAGATACTCCTGTTTCCGGTGATAGTTCTTTGCAGTTTGATTCWCATTCGCATTTGATTTCGCATGTGCCTTCTCAGCTTCACCTTCCTCAACATGCTTTGACTAGTATTGGTGATGGGGTGTTTGATTTGGATCCTTCTGCAACGAAGCTCTTGGCTCAGAATATCTTTAGTAATGCTGACTCTATCTTGCAGTTCAAAAGAGGGTTGGAGGAAGCCAGTAAATTTCTTCCCCCTGGGCCAAGGCTTTCCACTGGCCTGGAGAGCAGTAGCATGCATGCAGAAGAGTCAAAGAGAAGGGTGGAGAAGGCTGCAGTGCCAGTGATGGTGGAGAATGATGCTAAGGAGAGATCAAACAGAGTTGTTGCTGGGCCATATCACATAGTTCCAGCAACAACAAAAGCTGCAAAAAATACAGCAGCGAGGAGTCTGGATGGGGTGAAGAGTAGGAAGCATCATGCTCGCCAGGGCGATGATGGTGAAGAAGAAAGATGCAACAAGCAATCTGCGGTTAGTGTTGAGGAAGAAAATGAAATATCTGAAATGTTTGACAAGGTGCTGCTTAGTGTTGAAAATGTCCCACTGTCTGCTGAACAGCAGGRTGGATTGGTTGTGGATACACAACTAATTGAACAACCACATTCATCCGAGGGAGGGAGGAGTCGATCCAAGAAAAAAGGCAGGAAGAAAGAAACTGTGGATTTGAGAACTCTTTTGGTTCTGTGTGCCCAAGCTGTGTCTGCCAATGACCAAAGGACTGCTAATGAACTACTAAAGCAGATCAGACAGCATTCCTTGCCCTTCGGCGATGCATATCAGAGGCTGGCTCGTTACTTTGCCGATGGCCTGGAGGCACGCATGGCTGGCACTGGCCCTGGAATTCATATATTCTATGCCTCTCTCAGCTACAAGAAGTTCAGTGCTGCTGATTTTCTCAAGGCCTACCAAGTTTTTATATCTGCTTGCCCTTTCAAGAAATTTGCACATTTCTTTTCAAATAAGATGATTTTGAACATAGCTGAAAAGGCAGAAACTCTTCATATTGTTGATTTCGGTATCCTGTATGGTTTCCAGTGGCCAATACTTATCAAATTTCTAGCCAAGAGAGATGGAGGGCCTCCCAAGCTGCGGATCACAGGAATTGAGTATCCCCAAGCTGGATTTCGTCCCACAGAAAGAATTGAGGAGAGTGGACGTCGTCTAGCTAAATATTGCAAGCTTTTCAATGTTCCCTTTGAGTACAAAGCCATAGCATCAAGACACTGGGAAACCATTCAGATTGAAGACCTTAACATCAAGGACAATGAGGTAGTTGCTGTGAACTGTCTGGTAAGGTTCAAGAATTTACTCGAGGAGACGGTTGAAGTGAACAGTCCTAGAAATGCAGTTTTGAATTTAATCAGGAGGATAAACCCAGCTATTTTTGCTCACACAGTCGTAAATGGTTCTTATAATGCCCCTTTCTTCCTCACACGCTTTCGGGAAGCACTGTTCCATTATTCTGCAATTTACGATATGTTTGATACTCTCATACCCCGAAACAATGCATGGAGGTCGATGCTTGAGAGAGAGTTTTTGGGTCGGGAGATCATGAATGTTGTAGCATGTGAAGGTCTAGAAAGGGTTGAGAGGCCTGAAACATACAAGCAGTGGCAGGCTAGGAATTCAAGAGCTGGTTTTAGGCAGCTACCACTGGATAAGGCKTTAATGKCCAAATTTAGGAGCAAGTTAAAGGAATGGTACCAACACCACAAAGATTTTGTTTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGGATTTTGTATGCCTCCTCCTGTTGGGTGCCAGCATGA 2478 0.4508 MDPNRVRNTDYINAYGFGDXGGALLSDFNDWDLHRQYNHPFDLTPSNAFDRFDADTFGLHAHAVSNSGSSEPFVPPSSASRVEKSMPGSAFGAVASMPDPSVEDTDFSETVRYISQILLEENFEDKPCMCYNPLSLQDTEKSFYDALNQEFPLSPNEHPLDIHQNLESPDGVSAGSFPTGSSGGCSNSNSSSTSXSSSENHLSSHDFKTLSPDTPVSGDSSLQFDSHSHLISHVPSQLHLPQHALTSIGDGVFDLDPSATKLLAQNIFSNADSILQFKRGLEEASKFLPPGPRLSTGLESSSMHAEESKRRVEKAAVPVMVENDAKERSNRVVAGPYHIVPATTKAAKNTAARSLDGVKSRKHHARQGDDGEEERCNKQSAVSVEEENEISEMFDKVLLSVENVPLSAEQQXGLVVDTQLIEQPHSSEGGRSRSKKKGRKKETVDLRTLLVLCAQAVSANDQRTANELLKQIRQHSLPFGDAYQRLARYFADGLEARMAGTGPGIHIFYASLSYKKFSAADFLKAYQVFISACPFKKFAHFFSNKMILNIAEKAETLHIVDFGILYGFQWPILIKFLAKRDGGPPKLRITGIEYPQAGFRPTERIEESGRRLAKYCKLFNVPFEYKAIASRHWETIQIEDLNIKDNEVVAVNCLVRFKNLLEETVEVNSPRNAVLNLIRRINPAIFAHTVVNGSYNAPFFLTRFREALFHYSAIYDMFDTLIPRNNAWRSMLEREFLGREIMNVVACEGLERVERPETYKQWQARNSRAGFRQLPLDKALMXKFRSKLKEWYQHHKDFVFDEDNNWMLQGWKGRILYASSCWVPA* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0121 825 ProSiteProfiles GRAS family profile. 437 823 IPR005202 -
Amo18g0121 825 MobiDBLite consensus disorder prediction 355 382 - -
Amo18g0121 825 PANTHER SCARECROW-LIKE PROTEIN 34 73 824 - -
Amo18g0121 825 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 73 824 IPR005202 -
Amo18g0121 825 MobiDBLite consensus disorder prediction 350 383 - -
Amo18g0121 825 MobiDBLite consensus disorder prediction 147 223 - -
Amo18g0121 825 MobiDBLite consensus disorder prediction 169 223 - -
Amo18g0121 825 Pfam GRAS domain family 446 822 IPR005202 -
Amo18g0121 825 MobiDBLite consensus disorder prediction 417 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0121 Amo-Chr18 2163929 2167271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0121 110 825 GRAS Transcription Factor Family AT1G07530 47.730 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo18g0121 GRAS 2.6e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0121 - - aip:107612146 1598.56