Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0120 ATGGCTGATCCAAGCCATGGTGGAAATCCGGCCACCGATTTCACAACTAATAGGGATGAAAATCCAGCTCCCTTTGATGAGAGTGATTTCTCTGCTGCAGCCCTAAAGTACATAGATGAAATGCTTATGGAAGAAGACATTGATGAAGAGTACAACATGTTCCAACATTCCTCGGCTCTCCTAACAGCTGAGAAATCACTTTATGATGCCATTGGCCAGAGGTATCCTTCTTCTGCCTCTACTTTGTCGTCTTCAACTTCTTCTTCTATCCAGCATCATAATTACTACCCCAATGTGGAGAGCCCTGGGGATAGTTATAGCAGTATTAGTTCTGGCAGCACTTGTGGCACCACCAATACTAGCAGCTCTGCTGACTACTTCTGGAGCGGTTTTGATCTTTCTATGATTCCATTGATGCCAAACACTTTACCTTTTCCTGATACCTTTAATTTTCAGTCCAATCCATCCTCCACCACCCCCCAATCTAACCACAGAAGCGACTTCACTGCCACAAACAATAAGGTCCAATTTCTTGCTGAGTCCATGGGAAGCAGTAGCAAGCAATCAGCATTGTACATGGATGACACTGAGCTATCCGAATTTTTTGATAAGGTACTTCTTGGAGCTGGATTGGGAAGAGGATCATCACAAGCTGATGAAGGCGTTCCCAAAGACTCTCGCGGTAAGAAGAGCCGTGCAAGGAAAAGAAATGACAAAAATGACGATGAAGTTATTGATCTGAGGTCATTGTTGATGCAATGTGCACAAGCAGTTTCTTCTGATAACCGTCCAATGGCAAAAGAGTTATTGATGCAGATTAAGCTGCATTCTTCTCCAACAGGTGATGCAACTCAGAGATTGTCCCATTACTTTGTAAATGCTCTCGAAGCACGCATGTCAGGGACAGGTACACACATTCATAGTGCCTTATCCACAAAAAGGCCCTCTGCTTCTGATATGGTCAAGGCCTACCAAATGTATGCATCAGCTTGTCCATTTGACAAGTTTGGAATCAGGTTCTCAATCAACTCAATTGACAATTCGGCCATGGAAGGTGTCCAAACTCTTCACATTGTCGAATTTGGCATCCGCTATGGCTTCAAGTGGCCTGGACTTATATATCGCCTATCCAGACTCCCCAGTGGGCCTCCAAAGCTTCGCATAACCGGGATAGAGTATCCACTGCCTGGTTTGAAGCTTGAGCAAACAGGGCAATGCTTAGCAAGGTATTGCGAGCGATTCAACGTCCCTTTCGAGTTCAATGCTGTTGTTGCAAAGAAATGGGAGAGAATCAAAGTTGAGGATCTCAAGATAAGGGAGAATGAGTTTGTAGCTGTGAATTGCATGTTTAGATTTGAGAATCTGCATGATGAGACAGTTGTGTTGGAGAATCCTAGAGATTCTGTTTTGGAGTTAATAAGGAAGGCTAATCCRAACRTATTTGTACATGGCATTATAAATGGTAACTATGATGCTGCATTCTTCGTGACAAGGTTTAAGGAGGCAATGTTTCATTACTCAGCAATGTTTGACATGCTTGATAACACTGTTGCCCGTGATGATCCTATAAGGTTGATGTATGAGGAAGCTATATTTGGGAAGGAAGTGATGAATGTTGTGGCTTGTGAAGGGAATGAGAGGATTGAGAGACCACACAATTACAAGAAATGGCAGGTAAGGAACACAAGAGCAGGGTTCAGGCAGCTTTCATTGGATGAACAAATGATTGAGAAGTTTAAGGATATGTTGAGAAATGAAGGTTATCATAAAGATTTCATGCTTCATGCTGATGGCAAATGGCTTCTACAAGGTTGGAAGGGCAGAATCCTATATGCTTCTTCTTGTTGGGTACCAGCATAG 1860 0.4301 MADPSHGGNPATDFTTNRDENPAPFDESDFSAAALKYIDEMLMEEDIDEEYNMFQHSSALLTAEKSLYDAIGQRYPSSASTLSSSTSSSIQHHNYYPNVESPGDSYSSISSGSTCGTTNTSSSADYFWSGFDLSMIPLMPNTLPFPDTFNFQSNPSSTTPQSNHRSDFTATNNKVQFLAESMGSSSKQSALYMDDTELSEFFDKVLLGAGLGRGSSQADEGVPKDSRGKKSRARKRNDKNDDEVIDLRSLLMQCAQAVSSDNRPMAKELLMQIKLHSSPTGDATQRLSHYFVNALEARMSGTGTHIHSALSTKRPSASDMVKAYQMYASACPFDKFGIRFSINSIDNSAMEGVQTLHIVEFGIRYGFKWPGLIYRLSRLPSGPPKLRITGIEYPLPGLKLEQTGQCLARYCERFNVPFEFNAVVAKKWERIKVEDLKIRENEFVAVNCMFRFENLHDETVVLENPRDSVLELIRKANPNXFVHGIINGNYDAAFFVTRFKEAMFHYSAMFDMLDNTVARDDPIRLMYEEAIFGKEVMNVVACEGNERIERPHNYKKWQVRNTRAGFRQLSLDEQMIEKFKDMLRNEGYHKDFMLHADGKWLLQGWKGRILYASSCWVPA* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0120 619 ProSiteProfiles GRAS family profile. 238 617 IPR005202 -
Amo18g0120 619 MobiDBLite consensus disorder prediction 147 171 - -
Amo18g0120 619 PANTHER SCARECROW-LIKE PROTEIN 14 182 618 - -
Amo18g0120 619 MobiDBLite consensus disorder prediction 213 241 - -
Amo18g0120 619 PANTHER SCARECROW-LIKE PROTEIN 14 21 89 - -
Amo18g0120 619 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 182 618 IPR005202 -
Amo18g0120 619 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 89 IPR005202 -
Amo18g0120 619 Pfam GRAS domain family 247 616 IPR005202 -
Amo18g0120 619 MobiDBLite consensus disorder prediction 1 27 - -
Amo18g0120 619 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0120 Amo-Chr18 2147256 2149193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0120 27 618 GRAS Transcription Factor Family AT2G29060 44.355 6.31e-176 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo18g0120 GRAS 3.1e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0120 - - aip:107614541 1190.25