Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0103 ATGGCTGGTAGGAATCATCAGCACCCAACAATGTTGCAAAAGTTTCCTGTTATGCAGCATCAGCAACAATTTCCGTATGGAACCTACTCAAATGGTGGTTTAAAGTATGCTATGACATCATGCAAAGCAAGTTCCTCAAGTGATGTGCATTCTGCAGGTTCAGCAGTGTTTGTCCAATCTCCATCAGAGAAAAACTTTGCAACTTTTGCCACTAATTTTCTCATGGGAGGAGTGTCTGCTGCAGTTTCCAAGACTGCAGTAGCGCCGCTTGAGCGCGCAAAGCTTCTACTCCAAAACCAAGATGAGATGATCAAGGCTGGCAGGCTCTCCGAACCCTACAAAGGCATCGGAGACTGCTTTGCCAGATCGATCCGAGACGAAGGGATCACTTCACTATGGAGAGGGAACACTGTCAATGTTATCCGTTACTTCCCAACACAGGCCTTGAACTTTGCATTTAAAGACTACTTTAAGGTACTATTCAACTTCAATAAGGACAGAGATGGGTACTGGAAGTGGTTTGGAGGTAACTTGTTATCTGGCAGCGCTGCTGGAGCTTCGTCGTCAGTGTTTGTTTATTCGCTGGATTATGCTAGAACTCGGCTTACCAATGATGCCAAGGCTGGTGGACAGAGGCAGTTCAATGGTTTGGTGGATGTTTACAGGAAGACCATTAAATCTGATGGCATTGCTGGCCTCTACCGTGGCTTCAACATTTCTCTTGCCGGAATCATTGTCTACCGGGGCTTGTACTTTGGAATCTATGATTCTGTTAAGCCTGTAATCTTGGTAGGATCATTGCAGGATAGTTTCATGGCAAGTTTTGCTCTGGGATGGGTTGTTACAAATGCTGCAGCATTTGCCTCCTATCCAATAGACACTGTCCGTAGAAGGATGATGATGACATCAGGAGAAGCCATCAAGTATAAGAGCTCCATAGATGCATTCTCCCAAATTCTGAAGAAGGAAGGTTCAAAATCACTCTTCAAAGGTGCCGGTGCTAACATCCTTCGCGCCATGGCTAGCGCCGGCGTCCTTGCCGGCTATGACAAACTTCAGATTCTTCTCCTGGGAAAGAAGTATAGTTCTGGAGGCTCTTAG 1101 0.4596 MAGRNHQHPTMLQKFPVMQHQQQFPYGTYSNGGLKYAMTSCKASSSSDVHSAGSAVFVQSPSEKNFATFATNFLMGGVSAAVSKTAVAPLERAKLLLQNQDEMIKAGRLSEPYKGIGDCFARSIRDEGITSLWRGNTVNVIRYFPTQALNFAFKDYFKVLFNFNKDRDGYWKWFGGNLLSGSAAGASSSVFVYSLDYARTRLTNDAKAGGQRQFNGLVDVYRKTIKSDGIAGLYRGFNISLAGIIVYRGLYFGIYDSVKPVILVGSLQDSFMASFALGWVVTNAAAFASYPIDTVRRRMMMTSGEAIKYKSSIDAFSQILKKEGSKSLFKGAGANILRAMASAGVLAGYDKLQILLLGKKYSSGGS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0103 366 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 16 365 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0103 366 PRINTS Mitochondrial carrier protein signature 72 85 IPR002067 GO:0055085
Amo18g0103 366 PRINTS Mitochondrial carrier protein signature 85 99 IPR002067 GO:0055085
Amo18g0103 366 PRINTS Mitochondrial carrier protein signature 135 155 IPR002067 GO:0055085
Amo18g0103 366 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Amo18g0103 366 PRINTS Mitochondrial carrier protein signature 234 252 IPR002067 GO:0055085
Amo18g0103 366 PRINTS Mitochondrial carrier protein signature 278 300 IPR002067 GO:0055085
Amo18g0103 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 160 IPR018108 -
Amo18g0103 366 Pfam Mitochondrial carrier protein 270 358 IPR018108 -
Amo18g0103 366 Pfam Mitochondrial carrier protein 68 164 IPR018108 -
Amo18g0103 366 Pfam Mitochondrial carrier protein 171 262 IPR018108 -
Amo18g0103 366 PANTHER ADP,ATP CARRIER PROTEIN, MITOCHONDRIAL 16 365 - -
Amo18g0103 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 261 IPR018108 -
Amo18g0103 366 Gene3D Mitochondrial carrier domain 70 362 IPR023395 -
Amo18g0103 366 SUPERFAMILY Mitochondrial carrier 66 351 IPR023395 -
Amo18g0103 366 PRINTS Adenine nucleotide translocator signature 69 81 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0103 366 PRINTS Adenine nucleotide translocator signature 113 134 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0103 366 PRINTS Adenine nucleotide translocator signature 146 158 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0103 366 PRINTS Adenine nucleotide translocator signature 172 185 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0103 366 PRINTS Adenine nucleotide translocator signature 274 290 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0103 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 269 355 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0103 Amo-Chr18 1960388 1962947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0103 7 366 Antiporters AT5G13490 70.909 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0103 K05863 - jre:108998717 556.984