Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0095 ATGTTTCATCCAGTCCACCTCATTGAACAAAGATCCAGTCATAAGGAGCCACGTGTCAGTGCCATATGGACAACTCTCGAGCTTCGCTTCAAGGAACTTGCAAAGTTCAAATTCACAGTAGCCACCAATTCCCCACCTGCAAACAAAGCCTCAAATCCAAATCTCAGAGCTTCAGCTGCCGGAGCTTCTGTAAATCCGGCACCAGCACCGGCATGGCAAGGAGCAGCCATAAAGCCTCTCCTAGCTTCCATAGCAACTGGAGTTATCCTCTGGTTTGCTCCCGTACCTAGCGGCCTGTCGAAAAACGCTTGGCAGCTGCTGGCAATTTTCCTGGCCACTATCGTCGGAATCATCACTCAACCACTGCCACTTGGTGCAGTGGCGCTGTTAGGCCTCGGCATCTCTGTCCTCACCAAAACCTTGACGTTCGCGGCGGCATTCTCAGGTTTCGGCGATCCCATCCCCTGGCTCATCTGCTTCGCTTTCTTCTTCGCCAAAGGATTCATCAAGACCGGCCTCGGAAACCGCGTCGCCTACCAGTTCGTCTCCCTCTTCGGTAGCTCCTCGCTAGGGTTAGGTTACAGCCTAGTGTTCAGCGAGGCCTTGCTTGCGCCAGCTATTCCATCAGTTTCAGCGAGAGCCGGCGGGATCTTCCTGCCGCTGGTGAAGTCTCTGTGCGCCGCGTGTGGTAGCAACCCCGGCGACGGAACAGAGAGGAGGCTAGGTGCGTGGTTATCGCTGACGTGTTTCCAAACTTCGGTAATATCTTCGGCTATGTTCCTGACCGGGATGGCGGCTAACCCTCTGTGCGCAAATCTGACTCAGAGCTCAATCAATCAAACAATTGGTTGGTTGGATTGGGCCAGAGCCGCCATTGTTCCGGGTTTAGTGTCGTTGGTGTTAGTCCCTTTGATATTATACATCATTTACCCGCCAACTCTGAAATCAAGCCCCGATGCTCCCAAGCTTGCGCGTCAGAAGTTGCAGAGCATGGGTCCTATGTCTTCTAATGAGAAGATTATGACTGCTACCTTACTTCTTACGGTGGGACTTTGGGTGTTCGGAGGGGGAGTTGCATGGGATACTCTCACTTGGTTTGCTGCTCTCATTGCAATGGCTGCCTACTTGAATAAATATGGCCTCATTGCTTGGTTCAGCCAAACTGTAGTCAAGTTTGTGGGAGGATTAGGTCTGTCATGGCAACTATCATTTGGGATTCTAGTACTTTTGTATTTCTACTCGCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTCACTGCCTTCCTCTCTGTCGCCACTGCGCTGGGGACTCCTCCATTCTTTGGAGCCATGGTGCTGTCATTCCTGTCCAATCTCATGGGTGGCCTTACCCACTATGGAATTGGCTCAGCTCCTGTTTTCTATGGAGCCAACTATGTGCCCCTTGCTCAATGGTGGGGCTATGGCCTGCTTATTAGTATCGTTAATATTTTTATCTGGCTGGGTCTTGGGGGTGTTTGGTGGAAAGTCATTGGCTTGTGGTAA 1536 0.513 MFHPVHLIEQRSSHKEPRVSAIWTTLELRFKELAKFKFTVATNSPPANKASNPNLRASAAGASVNPAPAPAWQGAAIKPLLASIATGVILWFAPVPSGLSKNAWQLLAIFLATIVGIITQPLPLGAVALLGLGISVLTKTLTFAAAFSGFGDPIPWLICFAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCAACGSNPGDGTERRLGAWLSLTCFQTSVISSAMFLTGMAANPLCANLTQSSINQTIGWLDWARAAIVPGLVSLVLVPLILYIIYPPTLKSSPDAPKLARQKLQSMGPMSSNEKIMTATLLLTVGLWVFGGGVAWDTLTWFAALIAMAAYLNKYGLIAWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGLLISIVNIFIWLGLGGVWWKVIGLW* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0095 511 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 94 356 IPR001898 GO:0016020|GO:0022857|GO:0055085
Amo18g0095 511 PIRSF DASS 356 511 IPR030676 -
Amo18g0095 511 PIRSF DASS 63 359 IPR030676 -
Amo18g0095 511 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 46 356 IPR030676 -
Amo18g0095 511 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 357 511 IPR030676 -
Amo18g0095 511 Pfam Sodium:sulfate symporter transmembrane region 79 356 IPR001898 GO:0016020|GO:0022857|GO:0055085
Amo18g0095 511 Pfam Sodium:sulfate symporter transmembrane region 359 511 IPR001898 GO:0016020|GO:0022857|GO:0055085
Amo18g0095 511 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 46 356 - -
Amo18g0095 511 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 357 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0095 Amo-Chr18 1874159 1876254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0095 66 510 Antiporters AT5G12860 80.462 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0095 - - vun:114169835 783.097