Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0092 ATGGCTTTTTATGCGTCTTTGTTTGGTTTGTGTTTTCAGGAGGAAGCACGGGCAGTGGGGCAGCTGAGGAGTGAGCGTTTGGCTAATTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGGTTGCTTGTGGCAGAGTTTATGCCCCATGAAACTCTCTCCAAGCACCTCTTTCACTGGGAGTCCCAGCCCATGAAATGGGCAATGAGGCTGAGAGTTGCCTTGTATTTGGCACAAGCATTGGAATATTGCAGCAGTCAGGGAAGGGCATTATACCATGATCTTAATGCTTATAGAATTTTGTTCGATCAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTAATGAAAAACAGCAGAGATGGCAAAAGTTATAGTACAAATTTAGCCTTCACCCCTCCAGAGTATTTAAGGACAGGAAGAATCATCCCAGAAAGTGTGATTTACAGTTTTGGTACACTTTTGCTTGATCTTCTTAGTGGCAAGCATATTCCACCAAGTCATGCACTTGACCTCATACGAGGGAAAAATTTTTCATTTCTGATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAAATAGTGAGACTAGCTTCGCGTTGCTTACAGTATGAACCTCGAGAAAGACCAAATGCCAAGTCGCTTGTGACTGCTTTAACTCCTCTTCAGAAAGAAGCTTCAGTACCTTCGCAAGTTTTGATGGGCATACTGGAGGAGGGTGCATCATCAAAAGAAACAGTTTCATTGACACCTTTTGGTGAAGCATGTTCTAGAAGAGATCTCACTGCAATATATGAAATACTGGAAAAGGTTGAGTATAAGGATGACGAGGATGTTGCAAATGAGCTTTCTTTCCAAATGTGGACAGATCAAATACAAGAAACCCTAAATGCTAAGAAGCATGGAGATTCTGCTTTTCGTGCCAAAGATTACCCTACAGCCATTGACTACTATACAAAGTTCATTGATGGTGGGACCATGGTATCGCCGACTGCTTATGCAAGGCGCTGCTTGTGTTACTTGATGAACAACATGCCWCAAGAAGCTCTTGGAGACGCCATGCAAGCTCAATCAATATCGCCGACCTGGCCAACTGCGTTCTATCTTCAAGCAGTGGCACTCTTCAGCCTTGGCATGGACAATGATGCGCAGGAAAGTCTTAAAGACGGCACAATGTTAGAATCCAGAAACCAGAGAAATTGA 1212 0.4348 MAFYASLFGLCFQEEARAVGQLRSERLANLVGCCCEGEERLLVAEFMPHETLSKHLFHWESQPMKWAMRLRVALYLAQALEYCSSQGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRIIPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFSFLMDSCLEGHFSNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKEASVPSQVLMGILEEGASSKETVSLTPFGEACSRRDLTAIYEILEKVEYKDDEDVANELSFQMWTDQIQETLNAKKHGDSAFRAKDYPTAIDYYTKFIDGGTMVSPTAYARRCLCYLMNNMPQEALGDAMQAQSISPTWPTAFYLQAVALFSLGMDNDAQESLKDGTMLESRNQRN* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0092 403 SUPERFAMILY Protein kinase-like (PK-like) 11 227 IPR011009 -
Amo18g0092 403 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0092 403 Pfam Protein tyrosine and serine/threonine kinase 12 222 IPR001245 GO:0004672|GO:0006468
Amo18g0092 403 Gene3D Tetratricopeptide repeat domain 292 403 IPR011990 GO:0005515
Amo18g0092 403 SUPERFAMILY TPR-like 302 397 IPR011990 GO:0005515
Amo18g0092 403 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 12 403 IPR045845 GO:0004672|GO:0009742
Amo18g0092 403 Gene3D Transferase(Phosphotransferase) domain 1 48 240 - -
Amo18g0092 403 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 12 403 - -
Amo18g0092 403 Gene3D Phosphorylase Kinase; domain 1 9 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0092 Amo-Chr18 1844328 1847598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0092 22 222 Glycoside Hydrolase AT3G07070 34.649 3.06e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Amo18g0092 PK_Tyr_Ser-Thr 5.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0092 - - gmx:732542 703.745