Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0087 ATGGCTGGTAGGAACCAACAGCACCCAACAATGGTGCAAAAGTTTCCTGTTATGCAGCATCAGCAACAATTTCCATATGGAACCTACTCAAATGGTGGTTTAAAGTATGCTATGATGGCAGCATCATGCAAAGCAAGTTCCTCAAGTGATGTGCATTCTGCAGGTTCAGCTGTGTTTGTCCAATCTCCATCAGAGAAAAGCTTTGCAACTTTTGCCACTAATTTTCTCATGGGAGGAGTGTCTGCTGCAGTTTCCAAGACTGCAGTAGCGCCGCTTGAGCGCGCAAAGCTTCTACTTCAAAACCAAGATGAGATGATCAAGGCTGGCAGGCTCTCCGAACCCTACAAAGGGATCGGAGACTGCTTTGCCAGATCGATCCGAGACGAAGGGATCACTTCACTCTGGAGAGGGAACACTGTTAATGTTATCCGTTACTTCCCAACACAGGCCTTGAACTTTGCATTTAAAGACTACTTTAAGGGACTATTCAACTTCAATAAGGACAGAGATGGGTACTGGAAGTGGTTTGGAGGTAACTTGTTATCCGGGAGCGCTGCCGGAGCTTCGTCGTCAGTGTTTATTTATTCGCTGGATTATGCTAGAACTCGGCTTACCAATGATGCCAAGGCTGGTGGACAGAGGCAGTTCAATGGTTTGGTGGATGTTTACAGGAAGACCATTAAATCTGATGGCATTGCTGGCCTCTACCGTGGCTTCAACATTTCTCTTGCCGGAATTATTGTCTACCGGGGTTTGTACTTTGGAATTTATGATTCTGTTAAGCCTGTAATCTTGGTAGGATCATTGCAGGATAGTTTCATGGCAAGTTTTGCTCTGGGATGGGTTGTTACAAATGTTGCAGCATTTGCCTCCTATCCAATAGACACTGTCCGTAGAAGGATGATGATGACATCAGGAGAAGCCATCAAGTATAAGAGCTCCATAGATGCATTCTCCCAAATTCTGAAGAAGGAAGGTTCAAAATCACTCTTCAAAGGTGCCGGTGCTAACATCCTTCGCGCCATGGCTAGCGCCGGCGTCCTTGCCGGCTATGACAAACTTCAGATCCTTCTCCTGGGAAAGAAGTATAGTTCTGGAGGCTCTTAG 1107 0.4607 MAGRNQQHPTMVQKFPVMQHQQQFPYGTYSNGGLKYAMMAASCKASSSSDVHSAGSAVFVQSPSEKSFATFATNFLMGGVSAAVSKTAVAPLERAKLLLQNQDEMIKAGRLSEPYKGIGDCFARSIRDEGITSLWRGNTVNVIRYFPTQALNFAFKDYFKGLFNFNKDRDGYWKWFGGNLLSGSAAGASSSVFIYSLDYARTRLTNDAKAGGQRQFNGLVDVYRKTIKSDGIAGLYRGFNISLAGIIVYRGLYFGIYDSVKPVILVGSLQDSFMASFALGWVVTNVAAFASYPIDTVRRRMMMTSGEAIKYKSSIDAFSQILKKEGSKSLFKGAGANILRAMASAGVLAGYDKLQILLLGKKYSSGGS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0087 368 SUPERFAMILY Mitochondrial carrier 69 353 IPR023395 -
Amo18g0087 368 Pfam Mitochondrial carrier protein 70 166 IPR018108 -
Amo18g0087 368 Pfam Mitochondrial carrier protein 272 360 IPR018108 -
Amo18g0087 368 Pfam Mitochondrial carrier protein 173 264 IPR018108 -
Amo18g0087 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 162 IPR018108 -
Amo18g0087 368 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 18 367 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0087 368 PRINTS Adenine nucleotide translocator signature 71 83 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0087 368 PRINTS Adenine nucleotide translocator signature 115 136 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0087 368 PRINTS Adenine nucleotide translocator signature 148 160 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0087 368 PRINTS Adenine nucleotide translocator signature 174 187 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0087 368 PRINTS Adenine nucleotide translocator signature 276 292 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo18g0087 368 PRINTS Mitochondrial carrier protein signature 74 87 IPR002067 GO:0055085
Amo18g0087 368 PRINTS Mitochondrial carrier protein signature 87 101 IPR002067 GO:0055085
Amo18g0087 368 PRINTS Mitochondrial carrier protein signature 137 157 IPR002067 GO:0055085
Amo18g0087 368 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Amo18g0087 368 PRINTS Mitochondrial carrier protein signature 236 254 IPR002067 GO:0055085
Amo18g0087 368 PRINTS Mitochondrial carrier protein signature 280 302 IPR002067 GO:0055085
Amo18g0087 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 263 IPR018108 -
Amo18g0087 368 Gene3D Mitochondrial carrier domain 72 364 IPR023395 -
Amo18g0087 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 357 IPR018108 -
Amo18g0087 368 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 18 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0087 Amo-Chr18 1732415 1734923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0087 7 368 Antiporters AT5G13490 70.801 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0087 K05863 - jre:108998717 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0087 18 1732415 1734923 Amo18g0087 18 1732415 1734923 ECH