Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0086 ATGAATAGTTCTGGTTTGGGAGGTAGTTTTTTAGGTGGTCCTGCTGGGGGTATCTTGGACCTCGAAMTGCCATTTCATAGACACCAACAACAATCCCAGATGGGTCATCCGTCGGTGACGGGACAGCATCACTTGAATATGAGGACTGATCTGGAAAATGATCACCCAATTGGCCTCATGGAACTCAAAGGGTCGAATGCGGGGGTGAATTTTGGTAAAGGAAAGGGAATTGCTTCTTCTAATCCTGCCAATAGTAATGATTTGAGCGATGATGACGATGCAGAAGATGGGAATTGCGAGAATTTTGATGGTGGGAAGAGCAAAAAGGGGTCTCCTTGGCAGCGAATGAAGTGGACAGACAATGTGGTTCAGCTTCTTATAGCTGTGGTGAGCTGTGTGGGGGACGATGGAACCATTAATGGCACGGATGGTCATAAAAGGAAATCCGGTGTCTTGCAAAAGAAGGGCAAGTGGAAAACCGTCTCCAAGATAATGATAAGCAAGGGTTGTCATGTGTCGCCGCAGCAGTGCGAGGACAAGTTTAACGACTTAAATAAGAGGTACAAGAGGTTAAATGATATACTTGGAAGGGGAACTTGTTGCCAAGTGGTTGAGAATCCTACACTGATGGATTCGATGCCAAACCTCTCAGCTAAGGCAAAGGATGATGTTAGAAAGATACTGAGCTCAAAACACCTGTTTTATAAGGAGATGTGTGCTTACCATAACGGGCAGAGGATACCAAACTTCCATGATCTTGACTTACAAGGTTATTCTTTGGATCATGGCAGGGACTCCAGAGATAACAATGGCTCTGAGGATGAAGCTGAGGATAACAATGAAAGTGATGATGATGATTTGGATAATGCACATGGGGATGGAGAGAGGGCGGATGAGTTCTGTGATAGAAGAAAATCGAGCGAGGAGGATTTCCATTTTTGGCCACAATCTATTGAGATGGACAAATTTGAAGTTGAAATGGCAAGGGTTTTTCAAGACCCAACAAAGTCAGTGAGGGAACGAAGAGAGTGGATCAAGATAAAGATGTTGCAGCTTCAAGAGCAAAGAGTGAGCTACCAAGTGCAAGCACTTGAACTCGAAAAACAACYATTTAAGTGGTTGAGATACTGCAGCAAGAAGGATAGAGAGCTGGAGAGGCTGAGGTTGGAGAACGAGAGGATGAAATTGGAAAATGAGCGCAGGGTCTTGAAACTGAAGCAGAAAGAGCAGGAAACAGATTTAAGTAGGCCTGAGATGTCCTTAGACCCTGCTTCTCTCGGAATTAATAGACCGCAAGGGAGGGAACATTTCAACTTTAGCTGA 1323 0.4452 MNSSGLGGSFLGGPAGGILDLEXPFHRHQQQSQMGHPSVTGQHHLNMRTDLENDHPIGLMELKGSNAGVNFGKGKGIASSNPANSNDLSDDDDAEDGNCENFDGGKSKKGSPWQRMKWTDNVVQLLIAVVSCVGDDGTINGTDGHKRKSGVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTCCQVVENPTLMDSMPNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNFHDLDLQGYSLDHGRDSRDNNGSEDEAEDNNESDDDDLDNAHGDGERADEFCDRRKSSEEDFHFWPQSIEMDKFEVEMARVFQDPTKSVRERREWIKIKMLQLQEQRVSYQVQALELEKQXFKWLRYCSKKDRELERLRLENERMKLENERRVLKLKQKEQETDLSRPEMSLDPASLGINRPQGREHFNFS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0086 440 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Amo18g0086 440 MobiDBLite consensus disorder prediction 274 288 - -
Amo18g0086 440 Coils Coil 377 413 - -
Amo18g0086 440 Coils Coil 349 369 - -
Amo18g0086 440 Gene3D - 118 190 - -
Amo18g0086 440 MobiDBLite consensus disorder prediction 70 113 - -
Amo18g0086 440 PANTHER F16F4.11 PROTEIN-RELATED 13 416 - -
Amo18g0086 440 MobiDBLite consensus disorder prediction 258 273 - -
Amo18g0086 440 PANTHER TRANSCRIPTION FACTOR TRIHELIX FAMILY-RELATED 13 416 - -
Amo18g0086 440 MobiDBLite consensus disorder prediction 407 440 - -
Amo18g0086 440 MobiDBLite consensus disorder prediction 258 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0086 Amo-Chr18 1729114 1731592 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo18g0086 Myb_DNA-bind_4 3.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0086 - - ccaj:109806698 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0086 18 1729114 1731592 Amo18g0086 18 1729114 1731592 ECH