Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0077 ATGAATTCAAACAACTGGCTATCATTCCCACTCTCTCCAACTCATTCATCACTACCACCTCTGGGAACATTGGTGAATGACAACATCGATAACTCCTTTCAAAATCATGATTGGAATCTGATAAACAATGAGAGCAGCAGCAGTAGTCAAGTTCCGAAGGTAGCAGATTTTCTTGGTGTGAGTAACAAGTCTGAGAATGAGTCAGATCTTGCAGGCTTGGATGATGACTCGGATTACTTGTTCAACGCAAACACAACCCTTTTGCCTCTGCAATCACTCACACTCTCCATGGCTACTGCCAACAAGGACTCCACTACTTCCGACACCACTTGTGCCACTGCCATCGTTGAAGCTTCAGCTGCTGCCCCGAGAAGAGCTTTGGATACCTTTGGTCAGAGAACTTCTATTTATCGTGGTGTAACAAGACATAGGTGGACTGGAAGGTATGAAGCTCATCTATGGGATAATAGTTGTAGAAGGGAGGGTCAATCAAGAAAAGCCATAAAGTTCAGAGGTCTAAATGCAGTTACAAACTTCGACATGAGTCGCTACGATGTGAAAGCCATTCTTGAAAGCAACACACTTCCCATTGGAGGAGGTGCTGCAAAACGCTTAAAGGAAGCTCAGGCTCTAGAATCTTCTAGAAAGACTAATAGAGATGATATCATAGCATTGGGATCCACCTTTCCATACGGATCTTCTTCATCAAACACAACCGCCACCAGATTTTTGCAGCAAGCAACAGCTTATCCTTTAATGCCGCAGCACCACTTCGATCATCATCATCATCATCAACCATTGTTAACGTTACAGAACCATGACATATCACAACATTACAACACTGATCCTGCTTCTTCTTCGTTTCATCATACTAATTCTTATCTCCAAACGCAGCTTCAGCTCCATCATCAACAGCATCAAACTACTTCTTCTTCTTCTTCGTCTTCATACAATAATAATAATGCTCAATTTTACAGCAGCTACCTTCAGGGATTCATGGACCATAACAATGGGAATGGCGGAGGAGGTTACCATCATCATCATCATAACACTAATAATATGATTGGGATTGGAATGGGTTCTAATAATAACTCCTCATCGAGCAATGCCACAGCAGTGGGATCAGCGGAGGAGCTTGCTCTTGTGAAGGTTGATTATGACATGCCTTCCGCGGGATACGGCGGCTGGTCGCCGGCYGCAGACACCATGCACGGTTCAAACGGCGGTGGTAATTGA 1236 0.4393 MNSNNWLSFPLSPTHSSLPPLGTLVNDNIDNSFQNHDWNLINNESSSSSQVPKVADFLGVSNKSENESDLAGLDDDSDYLFNANTTLLPLQSLTLSMATANKDSTTSDTTCATAIVEASAAAPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKTNRDDIIALGSTFPYGSSSSNTTATRFLQQATAYPLMPQHHFDHHHHHQPLLTLQNHDISQHYNTDPASSSFHHTNSYLQTQLQLHHQQHQTTSSSSSSSYNNNNAQFYSSYLQGFMDHNNGNGGGGYHHHHHNTNNMIGIGMGSNNNSSSSNATAVGSAEELALVKVDYDMPSAGYGGWSPAADTMHGSNGGGN* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0077 411 MobiDBLite consensus disorder prediction 299 318 - -
Amo18g0077 411 Gene3D AP2/ERF domain 136 164 IPR036955 GO:0003700|GO:0006355
Amo18g0077 411 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 166 - -
Amo18g0077 411 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 167 370 - -
Amo18g0077 411 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 5 166 - -
Amo18g0077 411 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 167 370 - -
Amo18g0077 411 SMART rav1_2 136 186 IPR001471 GO:0003700|GO:0006355
Amo18g0077 411 SUPERFAMILY DNA-binding domain 135 182 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0077 Amo-Chr18 1653583 1656851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0077 120 410 AP2-EREBP Transcription Factor Family AT3G20840 43.827 2.46e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0077 K09285 - gmx:100788471 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0077 18 1653583 1656851 Amo18g0077 18 1653583 1656851 ECH