Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0057 ATGGGGGTTGATCCCAACAAGTCTAATTTTGTTGCTGCATTGTATGCTAAATTTCTTCCAAAGTCTATGTGGAATAAGAAAGTTGAGTTGTACAAGAGTTTTGGATTAACTGATGACAACATTTGTGAGGCATTTGTGAAGCACCCTTTCTGTATGCTAAAATTTGTGCAGAAAATTGAGGCCTGCATTGGATTCTTTGTCAAAGAACTCGGTTGGGAGCCTGCTGAAGTAACCAATAATTCGGTTCTTCTCTCACTGGATTTGGACAAAAGGGTTGTTCCGAGGGCTGCTGTTGCTATTGTTGGTGTAGTGATAACTGATGATGCAGGGATGCAGGGGATAGTGGTGATAATGGGGAGGATTTTTTATTTTTGTTTAAGGGCAAAATTGTCCCAAAAATTTTATTTATGGACAAAAGGATAA 423 0.3901 MGVDPNKSNFVAALYAKFLPKSMWNKKVELYKSFGLTDDNICEAFVKHPFCMLKFVQKIEACIGFFVKELGWEPAEVTNNSVLLSLDLDKRVVPRAAVAIVGVVITDDAGMQGIVVIMGRIFYFCLRAKLSQKFYLWTKG* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0057 140 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 98 - -
Amo18g0057 140 Gene3D Transcription termination factor 3, mitochondrial 1 103 IPR038538 -
Amo18g0057 140 Pfam mTERF 21 98 IPR003690 GO:0003690|GO:0006355
Amo18g0057 140 PANTHER CGI-12 PROTEIN-RELATED 1 98 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0057 Amo-Chr18 1250654 1251646 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo18g0057 mTERF 6.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0057 K15032 - pvy:116132764 98.2117