Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0037 ATGAACAATAGTTTCAATCAGCACAAGATGATGTGTTATAAGCGCAAAAGAGCTCTGAAGACTACATCGACCCCTGGACGTGAAGGTCTAAGACCTAGCCATTTGACAAGGGCTACTGTAGGGCAACAATTGATTTCGGAATCAGATGATAAACAGGAACTTGCAGAAGAGAAGGTTGGGAAAGATGAAACAGAAAATGGAAATGTTGATGGTGAGAATGAGATTGATGAAGATGTTGAGGATGTAGGAAATGAAGATGGTGATGATGAAGGTGGCAAAGAAGAGCAGGTTGGGAGAAGACGTTACGATCTTCGGAATCGTCCAGATGTCCGCAGGTCCTCCATGGCAGAATGTAAGATCCAACCAAGATCTCCACAAAGAGTGCTACATCAAGGCATGGGCACTAAGGTTAAMAAGGGTGTAAAGAAGGGTGGATCACGAGTGCAGAAGCGTTGTTGGTTAAGGCCTGCATATTCTGATGATTCCCKTATTGTGGATGAGCTGAACCAATATCCTGCTATTCCATGGGGTCATGGGGACAGCAGACCTTGCCAACCATGGCTTTTTGGAGGATTAGACATGCATGGGATAACAACTTGGGGATTAAATGTTGCTGCCTCAGGTTGGGTTCATGAAGRAGATGCTTTTTCCACCTCRGTAACTGGGGTTCAAACTGCTGGWCCAAGCTCTAAGGGTGGGGCAGATATCCAACCTTTGCAGGYCGTYGATAGTGCCAGTTTTGATGAYATAGGGGGGCTCTCTRAGTACATTGATGCTTTGAAGGAAATGATTTTCTTTCCCTTGTTGTATCCYGAATTCTTTGCAAGTTATCATATCACACCACCTAGGGGGGTGTTGTTATGTGGCCCCCCTGGCACAGGYAAAACTTTGATTGCAAGAGCTCTGGCTTGTGCTGCTTCAAAAGCTGGCCAGAAGGTCAGCTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAATGGGTTGGTGAGGCTGAAAGACAACTGAAACTACTTTTTGARGAAGCTCAAAAGAAYCAACCTTCTATCATATTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAKCAAGAGCAGATTCATAATTCCATTGTTTCCACCTTGCTAGCTTTGATGGAYGGTCTTGATTCTCGTGGACAAGTTGTTCTGATTGGAGCMACCAACAGGATTGATGCCRTTGATGGAGCCTTGCGGCGCCCTGGTAGATTTGATCGGGAATTTAAGTTTCCATTGCCTGGTTGTRAGGCACGTTCTGAAATATTAGACATCCACACACGCAAGTGGAAACATGCTCCTTCARATGAACTGAGAATGGAACTTGCATCTAGTTGTGTAGGATATTGTGGTGCCGACCTAAAGACCCTCTGTACTGAAGCTGCTATTTGTGCATTTCGTGAAAAATATCCACAAGTCTATACTAGTGATGACCAATTTCTCATAGATGTTGATTCAGTCAAGGTTGAAAAGTATCACTTTACTGAAGCTATGTCAACAATTACTCCTGCTGCTCATAGGGGTGCARTTGTGCACTCTAGGCCATTGTCTCTAGTTGTTCGACCATGTCTTCGCAGGCATCTAGAGGCAGCCATGGGTATTGTATCTGATATTTTCCTTCCAGTTTCAGTTGCATCAGAATTTATTAAACWATCAACGCATKCCTTTGGGCGCGCAATTCCACTTGTGTATCGACCTAGACTTCTACTTTGTGGAAGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCAGTTTTACATGAACTGGAAAAGTTTCCTGTTTTTTCATTAGGTATTTCAGTTCTTGTATCAGATTCAAGTGCAATAACACCAGAGGAGGCATTGATTCRTATATTTAATGAAGCTAGACGAACAAYRCCRTCAATTCTCTATTTACCACAGTTTGATGTGTGGTGGGAAACTGCACATGAACAGCTCCGGGCTGTTCTCCKAACCTTACTAGAAGAATTGCCATCTGACTTGCCTATATTACTGTTTGGAACATCATCAGTCCAGCTTGCTGAAGTTAAAGAAGTGCCTATTTCAGTTTTCCCTCATGATTCAGTTTATCAASTGAACATACCATCAGCCGAAGATAGGATGYTGTTTTTTAMTGATTTAGTGGAAGCTGTTTTGTCGGTCTTTTCTGGGATAATGAACAAGAAACCCCTGGACACAGGATGCTTTTCTGAACTTCCCAAGGCACCTAAACTAGCAAGTGGTCCAAAGGCATCCGAACTTAAAGCAAAGGTGGAAGCTGAGCAACATGCACTCCGCAGATTGCGSATGTGCCTTAGAGATGTTTGTAACAAGTATGTCAACAGCTTGGGAGATCTATTTAGTGTGATTTCTGCCGTTTGA 2382 0.4303 MNNSFNQHKMMCYKRKRALKTTSTPGREGLRPSHLTRATVGQQLISESDDKQELAEEKVGKDETENGNVDGENEIDEDVEDVGNEDGDDEGGKEEQVGRRRYDLRNRPDVRRSSMAECKIQPRSPQRVLHQGMGTKVXKGVKKGGSRVQKRCWLRPAYSDDSXIVDELNQYPAIPWGHGDSRPCQPWLFGGLDMHGITTWGLNVAASGWVHEXDAFSTSVTGVQTAGPSSKGGADIQPLQXVDSASFDDIGGLSXYIDALKEMIFFPLLYPEFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSXQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAXDGALRRPGRFDREFKFPLPGCXARSEILDIHTRKWKHAPSXELRMELASSCVGYCGADLKTLCTEAAICAFREKYPQVYTSDDQFLIDVDSVKVEKYHFTEAMSTITPAAHRGAXVHSRPLSLVVRPCLRRHLEAAMGIVSDIFLPVSVASEFIKXSTHXFGRAIPLVYRPRLLLCGSEGTGLDHLGPAVLHELEKFPVFSLGISVLVSDSSAITPEEALIXIFNEARRTXPSILYLPQFDVWWETAHEQLRAVLXTLLEELPSDLPILLFGTSSVQLAEVKEVPISVFPHDSVYQXNIPSAEDRMLFFXDLVEAVLSVFSGIMNKKPLDTGCFSELPKAPKLASGPKASELKAKVEAEQHALRRLRMCLRDVCNKYVNSLGDLFSVISAV* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0037 793 Gene3D - 421 506 - -
Amo18g0037 793 PANTHER AAA DOMAIN-CONTAINING 10 780 IPR045199 -
Amo18g0037 793 MobiDBLite consensus disorder prediction 49 68 - -
Amo18g0037 793 MobiDBLite consensus disorder prediction 1 101 - -
Amo18g0037 793 Pfam AAA+ lid domain 448 484 IPR041569 -
Amo18g0037 793 Pfam ATPase family associated with various cellular activities (AAA) 285 420 IPR003959 GO:0005524|GO:0016887
Amo18g0037 793 Gene3D - 244 512 IPR027417 -
Amo18g0037 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 569 718 IPR027417 -
Amo18g0037 793 MobiDBLite consensus disorder prediction 69 91 - -
Amo18g0037 793 CDD AAA 281 420 - -
Amo18g0037 793 SMART AAA_5 281 422 IPR003593 -
Amo18g0037 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 508 IPR027417 -
Amo18g0037 793 PANTHER BNAC08G44480D PROTEIN 10 780 - -
Amo18g0037 793 Gene3D - 550 707 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0037 Amo-Chr18 982778 985744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0037 233 485 Calmodulin-binding Proteins AT3G56690 36.122 4.60e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0037 K22531 - gmx:100787765 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0037 18 982778 985744 Amo18g0037 18 982778 985744 ECH