Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0033 ATGGATCACCAATCTGGCCAGGGATTTGATTCAGATGATAGTGACCTTGATATACAAGTAGAAATTAGCAGAAGACTTGGTAAAGTGGAAGATGGATTTCCAAAAGACATGGAACTTTGTGCAGGTGAAGAGGAGAAGTTTATTGAACAATCTGTAGCAGATATTTCAGCAGATGGAGAAGCTTTAGAACCATTCATAGGCATGGAGTTCAATTCAAGAGAAGAGGCCAGAGAACTATACATTGCCTACGGTAGGCGGATAGGATTTACAGTACGAATACACCATAACCGTCGTTCACGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTTTCGTGCAAAAAAGTATGTGCACAGAAAAGACAGAGTGCTTCCTCCTCCACCAGCCACCCGAGAAGGCTGTCAGGCCATGATAAGGTTGGCTTTGCGGGATGGAGGGAAGTGGGTTGTCACAAAATTTGTTAAGGAGCATACTCATAAGCTAATGAGTCCTAGTAAAGTTCCATGGCGAGGATCTGGGAAGCACTTGGTGAGTGAGGATGAGAAAGATAAGAGGATCCGTGAACTATCGCTTGAGTTGTACAACGAAAGGCAAAAATACAAACGACGTTGCGCTGCATATGAAGAACAGTTAAATAATATCCTGAACTATTTGGAAAAGCACACAGAACACATGTCTGAAAAAGTTGCAGATATAGTCCGAAGTATAAGAGAGATTGAGGAGGAAAAAGCAGATTCAGATATCTGA 765 0.4183 MDHQSGQGFDSDDSDLDIQVEISRRLGKVEDGFPKDMELCAGEEEKFIEQSVADISADGEALEPFIGMEFNSREEARELYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHTHKLMSPSKVPWRGSGKHLVSEDEKDKRIRELSLELYNERQKYKRRCAAYEEQLNNILNYLEKHTEHMSEKVADIVRSIREIEEEKADSDI* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0033 254 Pfam FAR1 DNA-binding domain 79 168 IPR004330 -
Amo18g0033 254 Coils Coil 196 223 - -
Amo18g0033 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 253 - -
Amo18g0033 254 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0033 Amo-Chr18 965145 967522 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g0033 FAR1 2.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0033 - - adu:107461491 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0033 18 965145 967522 Amo18g0033 18 965145 967522 ECH