Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0031 ATGGGGTTCTCTTCATCACAATTCTTCATTGGATTTCTTCTTGAGCTTGTGGTTTTGGCATGCCTATGGTTGCAAGTTTCAAGCTTTGGCTCCATGTCTTCTGTGGCAGCCTCCTTTGGTGACAAACATGTTGTTTGTGGACTGAAACCAGATGGGTCTCATACTGTGACCTGTAATGGAACAAACTCAGCCATAATTCATGAAACACCAGCTCAATTCCAGTTCCTTGGTCTAACTGGTGGCGATGGCTTTGTGTGTGGGATTCTAATGAGTTCTAAGCAACCTTATTGTTGGGGTAGAAATCGTTTTATTACAAAAAAAATTGATGTGTCACAACCTTTGGTTAAAGGAGCTCAGTACCTAGAAATCAGTGCTGGGGATAACCATCTTTGTGGATTGAGGAAACCGTTGATTTGGGGAAAAACAGAAAGGAAAAATTCAATTGTTGATTGTTGGGGCTTCAACATGACCCGTACCTATGTGTTTGATGGAATAATTCAATCAATCTCAGCTGGCTCTGGTTTCAACTGTGGCTTGTTTTCTCAAAACAGGACTGCATTCTGTTGGGCTAATCATTATGCTAATAGTCTAGCAATTCTTGCGGTTCCTCGTGGCAAGAGATTCCGGAAGATTGCTGCTGGTGGGAATCATGTGTGTGGAATCCTAGAAGGGGTGAATTCTAGGACTGTTTGTTGGGGAAGGAGCTTGGACGAAATGCCGGTGAAAATGGCGAAAATCACATCGATACATGCAGATGCAGGACAAGGCCTAGGTAATGTTTTATTGCCTCCAAATGAGTCCATGATCTCTATAGTAGGAGGAAAGTTCCATGCCTGCGGCATTAAGACCAATGGTCTTGGAGTCATTTGCTGGGGCTATACCTATGGCCAAGGAACACCACCAAGTGGGACTAAAATAACTGATATTGCTGCTGGTGACTATTTCAATTGTGCAAATCTTGCTGAGAAATCTAATCAGATTCTTTGTTGGGGTGTTGGATACTCTAACTCTCTTCCAAAGCCAGCTGTGTTGCCAGGGAAGTGCAATTCCAATTCATGTCCTCCAGGTTCCTATGAAATGGAGCAGCATAAGGATAAGGGTGTTTGCAATTCATCAAATGCTCACTTTTGTGTTCCTTGCAGTGGTGCTTGTCCTTATGAAATGTATCAGACAAGTCCTTGCAATTTGACATCTGATAGGATATGTGAATATAACTGCTCTGCTTGTGTCTCACCTCAGTGCTTCTCCAATTGCTCCCCTTCTTCTCTCGGTTCTCCTCCCACCGGGAGTAGCAAAGATGAAAGATTCTGGTCTCTCCAGGTGCCGGTTGTTGTTGCGGAGATAGCTTTCGCAATTTTCATGGTTAGTATTCTATCTACAACTGCAGTTTTGTATGTTAGGTACAAGCTTAGAGATTGTCAGTGTTCAGCAACAAGGTCATCAAAGGTGAAGAAACATAATGTGAGTTCTTCTTCACTTCAAAAGGAGAATAGTAAGACTCGTCCGGAGATTCGGAAGGCTAAGAAGTTTAACTATGAAGAACTTGAAAGGGCAACTAGTGGATTCAAAGAAGAATATATAGTGGGGAAGGGAAGCTTTTCATGTGTGTTCAAGGGTGTTCTGAAAGATGGAACTGTTGTTGCTGTCAAAAGAGCCATAAGAGCACAGAAGAGTTCCAATGAGCTACAAACAGAACTTGACTTGCTCTCAAGGTTGAACCATGCACATTTGCTCAGTCTCCTAGGATATTGTGAAGAAGGAGGAGAGATAATTCTTGTTTATGAGTTCATGGCTCATGGTTCTTTGCACCAACACCTCCATGGCCAAAACAAGGAGTTAAAAGAACAGCTTGATTGGATCAGAAGGGTAACAATCGCGGTCCAAGCAGCGCGAGGAATAGAGTATCTCCATGGCTATGCTTGCCCTCCTGTGATTCATAGGGACATCAAGTCTTCAAACATTCTCATTGATGAAGAACACAATGCAAGAGTGGCTGATTTCGGTTTATCATTACTTGGCCCTGCAGATAGCAGCACCCCACTTGCTGAGCTACCTGCCGGAACACTCGGCTATCTTGATCCCGAGTACTATAGGCTTCATTATCTCACAACAAAATCCGATGTCTACAGCTTCGGTGTCCTACTTTTGGAACTCCTAAGTGGTAGAAAAGCCATTGACATGCAATATGATGAAGGGAACATAGTTCAATGGGCAAAGCCTCTAATCAAATCAGGGGATATTGCTGCAATCCTTGACCCGGTTCTGAAACCTCCTCCTGATCTTGCAGCCTTGAAAAAGGTTGCAATTGTGGCTTGCAAGAGTGTGAGAATGAGAGGGAGGGATAGGCCTTCAATGGACAAAATAACAACAACTTTGGAGCATTCTCTTGCAAGGTTAATGGGTAGCCCTTGTACTGAACAACCAATTTTGCCAACTGAGGTAGTTTTGGGAAGTAGCAGATTGCACATGAAATCATCTCAGAGGTCTTCAAACAGGTCAGAAATCGATGTTGGAGAGAACGAGGATCAGAGGTATGAGTTTAGAGCACCTTCATGGATAACATTCCCAAGTGTGACTTCTTCTCAGAGGATAAAGTCATCAAGCTCAGAGGCTGAGGTTGATGTGAAGAATAATAATGGTAATGTTTGTGAAGGGAAGATCATAAACATTGGTAATAACAATGTTGGAAGTGGTGGTGATGTTTTGAAGAGTCTTGAGGAAGAGATTGGTCCTGCTTCTCCCCAAGAAARGTTGTTCTTGCAGCATAACTTCTAA 2775 0.4299 MGFSSSQFFIGFLLELVVLACLWLQVSSFGSMSSVAASFGDKHVVCGLKPDGSHTVTCNGTNSAIIHETPAQFQFLGLTGGDGFVCGILMSSKQPYCWGRNRFITKKIDVSQPLVKGAQYLEISAGDNHLCGLRKPLIWGKTERKNSIVDCWGFNMTRTYVFDGIIQSISAGSGFNCGLFSQNRTAFCWANHYANSLAILAVPRGKRFRKIAAGGNHVCGILEGVNSRTVCWGRSLDEMPVKMAKITSIHADAGQGLGNVLLPPNESMISIVGGKFHACGIKTNGLGVICWGYTYGQGTPPSGTKITDIAAGDYFNCANLAEKSNQILCWGVGYSNSLPKPAVLPGKCNSNSCPPGSYEMEQHKDKGVCNSSNAHFCVPCSGACPYEMYQTSPCNLTSDRICEYNCSACVSPQCFSNCSPSSLGSPPTGSSKDERFWSLQVPVVVAEIAFAIFMVSILSTTAVLYVRYKLRDCQCSATRSSKVKKHNVSSSSLQKENSKTRPEIRKAKKFNYEELERATSGFKEEYIVGKGSFSCVFKGVLKDGTVVAVKRAIRAQKSSNELQTELDLLSRLNHAHLLSLLGYCEEGGEIILVYEFMAHGSLHQHLHGQNKELKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSTPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLELLSGRKAIDMQYDEGNIVQWAKPLIKSGDIAAILDPVLKPPPDLAALKKVAIVACKSVRMRGRDRPSMDKITTTLEHSLARLMGSPCTEQPILPTEVVLGSSRLHMKSSQRSSNRSEIDVGENEDQRYEFRAPSWITFPSVTSSQRIKSSSSEAEVDVKNNNGNVCEGKIINIGNNNVGSGGDVLKSLEEEIGPASPQEXLFLQHNF* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0031 924 Pfam Protein kinase domain 523 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0031 924 Gene3D Phosphorylase Kinase; domain 1 479 596 - -
Amo18g0031 924 SUPERFAMILY Protein kinase-like (PK-like) 503 792 IPR011009 -
Amo18g0031 924 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 352 402 IPR001368 GO:0005515
Amo18g0031 924 Gene3D - 159 254 IPR009091 -
Amo18g0031 924 SMART serkin_6 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0031 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Amo18g0031 924 Gene3D - 22 158 IPR009091 -
Amo18g0031 924 SUPERFAMILY RCC1/BLIP-II 151 354 IPR009091 -
Amo18g0031 924 Gene3D - 255 411 IPR009091 -
Amo18g0031 924 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 7 924 - -
Amo18g0031 924 ProSiteProfiles Protein kinase domain profile. 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0031 924 PANTHER RECEPTOR-LIKE KINASE 7 924 - -
Amo18g0031 924 MobiDBLite consensus disorder prediction 822 841 - -
Amo18g0031 924 Gene3D Transferase(Phosphotransferase) domain 1 597 801 - -
Amo18g0031 924 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Amo18g0031 924 CDD STKc_IRAK 528 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0031 Amo-Chr18 954658 957858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0031 12 924 Receptor kinase-like Gene Family AT3G59420 58.861 0.0 1064
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Amo18g0031 Pkinase 8.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0031 - - gmx:100797455 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0031 18 954658 957858 Amo18g0031 18 954658 957858 ECH
Amo13g0589 13 7461594 7465420 Amo18g0031 18 954658 957858 PCT