Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0005 ATGGCAGTAATGGAAGAAAAGCATTCTCTTCTCCATGGAACAATTGAAGCTACTATCTTTGATGCCACACCTTATTCGCCTTCATTTCCCTTTAATTGTCTATGGCCAAATGGAAAGCCAGCTTTTGTGACCATCAAAATAGGCAACAAGGTGATGGCAAAAACTACACAAGAAAGAGGGCGTGTGTGGAACCAAACCTTTCAGATTCAATGTGCTCATCCAAGTGATTCAACCATCACCATCACTCTGAAAACACCATGTTCCATATTGGGAAAATTCCAAATTAAGGCTCAACAATTGAAAGAAGGAAGCTTCATGAATGGTTTCCTCCCCCTCCTAATGGAAAATGGAAAACCAAGCACACAACTCAAGTTGAGGTTCATATTATGGTTTAAGCCAGCAGATTTGGAGACAAGTTGGGCAAAGATAATTAGCATGGGGATTATAAAGGGATTAATGATGCTACATTCCCTCAGAGGTCTAATTGTCAAGTTAAGCTCTATCATGATGCTCATCATTCACATGATTTTCAACCTCCTTTTGATCTATGTGGAGCACCAAGAAATCTATGGGAGGATGTCTACAAAGCAATTGAGGGTGCAAAGTATTTAA 612 0.3971 MAVMEEKHSLLHGTIEATIFDATPYSPSFPFNCLWPNGKPAFVTIKIGNKVMAKTTQERGRVWNQTFQIQCAHPSDSTITITLKTPCSILGKFQIKAQQLKEGSFMNGFLPLLMENGKPSTQLKLRFILWFKPADLETSWAKIISMGIIKGLMMLHSLRGLIVKLSSIMMLIIHMIFNLLLIYVEHQEIYGRMSTKQLRVQSI* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0005 203 PANTHER PHOSPHOLIPASE D 6 147 IPR015679 -
Amo18g0005 203 PANTHER PHOSPHOLIPASE D ALPHA 6 147 - -
Amo18g0005 203 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 129 IPR035892 -
Amo18g0005 203 Pfam C2 domain 41 112 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0005 Amo-Chr18 388826 390892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0005 33 152 Phospholipase D Gene Family (Wang group) AT1G55180 48.780 3.86e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0005 K01115 - gmx:100807431 230.72