Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0003 ATGGACAAAGTTGTTTTGATTGTGTTTGTGACACCATTACTCTTGTTCTTCATCCTCTTCTACAGAAGGATCACATGGCTTAGACTCATCAAATCTAAACACATGAAGAATCAACTTCCCTTAGGCACTCTTGGATGGCCTTTTGTTGGTGAAACCATTGAGTTTATTTCCTGTGCCTACTCTGATCATCCTGAGAGCTTCATGGACAAGCGTCGAAACATGTATGGGAAGGTGTTCAAGTCTCACATATTTGGGAGCCCAACAATTGTGTCCACAGATGCAGAAGTTAATAAGTTCATTCTGCAAAGTGATGCAAAGGCTTTTGTTCCTTCATATCCCAAGTCTCTGACTGAGTTGATGGGAAAGTCTTCCATTTTGCTCATCAATGGAAGCTTGCAGAGGAGAATACATGGACTAGTTCAGATCACTAGAGAGATGCAGAACTATGTCCAACAATCAATGACTAATTGGAAGGAGGATCAACCTGCATTGATTAGTTTGGATCCTGGTGAAGAAATGGAGCTTCTGAAGAAACATTTTCAGGAATTCATGTCTGGCCTCATGTCTCTACCAATAAATTTGCCAGGAACTAAACTTCATCAATCCTTACAGGCAAAAAAAAAGATGGTGAAGTTAATGCTGAGAACTATTGAAAGTAGAAGAGAATGTGGAATCTCCAAAGTTCCAAAAGATGTAGTGGATGTGCTTCTGAATGATGAAAATGATAGGTTAACAGATGAATTAATAGCAGACAATATGATTGATATGATGATTCCAGGGGAGGATTCAGTGCCAGTTCTTATGACTCTTGCTGTAAAGTATTTATCAGAATGCCCTACTGCTTTGCAACAATTGAGAGAGGAGAATGTGAAGCTTAAGAAACTCAAAGATCAGCTTGGGGAGCCCTTGAATTGGAGTGATTACTTATCATTGCCATTTACTCAAACAGTTATCACAGAAACTTTGAGGATAGGAAATGTAATAATTGGAGTTATGAGAAAGGCTATGAAAGATGTAGAAATAAAAGGGTATTTTATACCAAAGGATGGTGTGTGTTAG 1059 0.3862 MDKVVLIVFVTPLLLFFILFYRRITWLRLIKSKHMKNQLPLGTLGWPFVGETIEFISCAYSDHPESFMDKRRNMYGKVFKSHIFGSPTIVSTDAEVNKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQRRIHGLVQITREMQNYVQQSMTNWKEDQPALISLDPGEEMELLKKHFQEFMSGLMSLPINLPGTKLHQSLQAKKKMVKLMLRTIESRRECGISKVPKDVVDVLLNDENDRLTDELIADNMIDMMIPGEDSVPVLMTLAVKYLSECPTALQQLREENVKLKKLKDQLGEPLNWSDYLSLPFTQTVITETLRIGNVIIGVMRKAMKDVEIKGYFIPKDGVC* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0003 352 SUPERFAMILY Cytochrome P450 36 349 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0003 352 Pfam Cytochrome P450 40 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0003 352 Pfam Cytochrome P450 194 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0003 352 Gene3D Cytochrome P450 30 352 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0003 352 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 27 349 - -
Amo18g0003 352 PANTHER CYTOCHROME P450 26 27 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0003 Amo-Chr18 373277 377185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0003 30 352 Cytochrome P450 AT3G13730 62.640 2.18e-150 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0003 K12638 - gmx:100782687 526.939