Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3127 ATGGCGGCAGCACCATCGCCACGGGAGGAGAACGTATACATGGCGAAACTGGCGGAGCAGGCAGAGCGTTACGAGGAGATGGTTGAGTTCATGGAAAAGGTGTCAGCCGCCGCCGATAACGAGGAGCTGACGGTGGAGGAGAGGAACTTGCTCTCGGTGGCGTACAAGAACGTGATCGGAGCTAGGCGCGCGTCGTGGAGGATTATCTCTTCCATCGAGCAGAAGGAGGAGAGTCGCGGCAACGAGGACCACGTTGCGGTGATCCGTGACTACAGATCCAAGATCGAGTCGGAGCTCTCCAACATCTGCGACGGGATCTTGAAGCTCCTCGACACCCGCCTCATCCCCTCCGCCTCCTCCGGCGATTCCAAGGTCTTCTACCTTAAGATGAAGGGAGACTACCACCGGTATCTCGCCGAGTTTAAGACCGGCGCAGAGCGCAAGGAGGCCGCCGAGAGCACCCTCGCGGCTTACAAATCTGCTCAGGACATTGCTAACGCGGAGCTGCCACCAACTCACCCAATCAGGCTGGGTCTTGCTCTAAACTTCTCTGTGTTCTACTACGAAATCCTCAACTCTCCGGATCGTGCTTGCAACCTTGCAAAACAGGCTTTTGATGAAGCCATTGCTGAATTGGACACACTTGGAGAGGAGTCTTACAAGGATAGCACTTTGATCATGCAACTCCTCCGTGATAACCTCACCCTGTGGACCTCTGACATGCAGGATGATGGAGCAGATGAAATAAAAGAAGCTCCTAAACCAGATGAACAGCAGTAA 780 0.5462 MAAAPSPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLAAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKPDEQQ* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3127 259 Pfam 14-3-3 protein 14 238 IPR023410 -
Amo17g3127 259 PANTHER 14-3-3 PROTEIN 5 255 IPR000308 -
Amo17g3127 259 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Amo17g3127 259 SMART 1433_4 8 251 IPR023410 -
Amo17g3127 259 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Amo17g3127 259 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Amo17g3127 259 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Amo17g3127 259 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Amo17g3127 259 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Amo17g3127 259 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Amo17g3127 259 Coils Coil 14 41 - -
Amo17g3127 259 PANTHER 14-3-3-LIKE PROTEIN 16R-RELATED 5 255 - -
Amo17g3127 259 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Amo17g3127 259 Gene3D - 2 251 IPR036815 -
Amo17g3127 259 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Amo17g3127 259 PIRSF 14-3-3 2 250 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3127 Amo-Chr17 135358048 135360331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3127 6 259 14-3-3 family AT1G78300 91.016 7.99e-173 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3127 K06630 - gmx:100792014 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3127 17 135358048 135360331 Amo17g3127 17 135358048 135360331 ECH