Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3108 ATGGCTGATCGAAAGAGGGAGCACAAGGTAGTGACTCGTTGTGGCTGCTTAGCTGAGATGAGAATTAAGCGAAAAGATGGTAGTGACAAGTGGTACGTCTCTCGGTTTTTGGACAACCATAACCATGAGCTTGTAGCTGGGAAGTATGTCGACTATTTGAGCTTGAGGGAGGTGGGTATAAGCATACCAAAAATATATCAGTCATTTGCAGCACAGGTTGGCAGTTTTAACCTTGTCAGGTTCACTAAGCAAGACATGTATAACGAGGTTTGA 273 0.4396 MADRKREHKVVTRCGCLAEMRIKRKDGSDKWYVSRFLDNHNHELVAGKYVDYLSLREVGISIPKIYQSFAAQVGSFNLVRFTKQDMYNEV* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3108 90 Pfam FAR1 DNA-binding domain 4 45 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3108 Amo-Chr17 135115369 135115686 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g3108 FAR1 4.4e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3108 - - aip:107620408 149.443