Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3074 ATGCGAGGTCCAGGATGTAAAGAGGAGCAGTTGTTCGTGGCATCCATGACCACAGCCTTTGAGCGGGCCCAGAGCATGTCAAGCTCCTGGGCCGCGTCGGCTGTGGCCTTTCTTTGCCACTCTTGTTCCTTCATCTGCAACAAAATAAAGTCCGTGTTTCTTCTTTTTTTTTCAATTTCTCCGACAACTGAGAAATTTGAATTTCTCACAAATAGTAAGACATTTGGTTGGAAGAGAGATACTAGTTTTCCTTTTGGATTAACAAATGAATTGAGAAGACAAAAAGATGGAAGGAGATTCACTGTTCTAAGAGTGAAGTGGGCACTAGCAGTTAAAGGAATAGAGTACCAATATGTGGAAGAAGATCTCAGCAACAAGAGTGACATGCTCCTTAAATACAACCCTGTCTACAAAAAGGTACCTGTTCTTGTGCACCAGGGTAAGCCCCTTGCTGAATCACTGCTCATTCTTGAGTATATTGATGAGACTTGGAAGCAAAACCCTCTTCTTCCACATTCTCCTTATGAAAGGTCCCAGGCTAGATTCTGGTCCAAATTCGTTGATGACAAGTGTATGCCAACAGTTGTGGCAGCGTTTTCCAAGGTAGGAGAAGAGCAACAGAAGGCAGCAGAAGAAACTCGAGAGAATCTAAAGAGGCTTGAGGTTGGACTTGAGGGAAAACGCTTCTTTGGAGGTGATAACATTGGCTTTGCGGACATTGCTATTGGTTGGCTTCCATACTGGATTGGAATAGCTGAGGAAGTTGTGGCCATCAACCTTATTGATGCCGAGTCAATGCCTAAGCTTAACTCATGGTTCCATGCTTTTATTGACATTCCAATTATCAAAGAACTCTTGCCTCCTCGTCACAAATTGCTCCATCACACCAAGGCATTCCTCCAAGCGTAG 909 0.4389 MRGPGCKEEQLFVASMTTAFERAQSMSSSWAASAVAFLCHSCSFICNKIKSVFLLFFSISPTTEKFEFLTNSKTFGWKRDTSFPFGLTNELRRQKDGRRFTVLRVKWALAVKGIEYQYVEEDLSNKSDMLLKYNPVYKKVPVLVHQGKPLAESLLILEYIDETWKQNPLLPHSPYERSQARFWSKFVDDKCMPTVVAAFSKVGEEQQKAAEETRENLKRLEVGLEGKRFFGGDNIGFADIAIGWLPYWIGIAEEVVAINLIDAESMPKLNSWFHAFIDIPIIKELLPPRHKLLHHTKAFLQA* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3074 302 Gene3D - 170 302 - -
Amo17g3074 302 CDD GST_C_Tau 174 299 IPR045074 GO:0004364|GO:0006749
Amo17g3074 302 CDD GST_N_Tau 102 164 - -
Amo17g3074 302 SUPERFAMILY GST C-terminal domain-like 162 300 IPR036282 -
Amo17g3074 302 Pfam Glutathione S-transferase, C-terminal domain 195 279 IPR004046 -
Amo17g3074 302 PANTHER GLUTATHIONE S-TRANSFERASE ISOFORM X1-RELATED 102 298 - -
Amo17g3074 302 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 173 299 IPR010987 -
Amo17g3074 302 SUPERFAMILY Thioredoxin-like 101 170 IPR036249 -
Amo17g3074 302 SFLD Main.3: Omega- and Tau-like 102 299 IPR045073 -
Amo17g3074 302 Gene3D Glutaredoxin 97 169 - -
Amo17g3074 302 Pfam Glutathione S-transferase, N-terminal domain 101 162 IPR004045 -
Amo17g3074 302 SFLD Glutathione Transferase (cytosolic) 102 299 IPR040079 -
Amo17g3074 302 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 89 168 IPR004045 -
Amo17g3074 302 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 102 298 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3074 Amo-Chr17 134614489 134615900 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3074 104 301 Glutathione S-transferase Gene Family AT2G29420 43.939 3.82e-63 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3074 K00799 - gmx:100813267 299.671