Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3067 ATGGGAAGCGAAGGGGTGAAGAAACCAAGAATCCTATGCCTTCATGGGTTCCGAACAAGTGGCCACATCCTCAAAACACAGTTACACAAGTGGCCCCAATCTGTTCACGACCACCTCGACCTTGAGTTCCTCGATGCTCCTTTTCCTTGTCAGGGAAAATCCGATGTTGAAGGAATCTTTGATCCTCCTTATTACGAGTGGTTCCAGTTCAACGAGGAATTTACGGAGTATACCAACTTTGATGAATGCGTACAATACATAGAAGATTACATGATCAAGCACGGACCCTTTGATGGCCTTCTGGGCTTCTCTCAGGGTGCTGTACTCTCTGCTGCGCTGACCGGTCTTCAGGAGAAGGGTGAAGCACTGACTAAGGTTCCAAGGGTGAAATTCATAATAATAATATCAGGGGCAAAGTTCAAGTCATCTTTGATAACGGAGAAAGCATATTCTAGCCCCATTACCTGTCCCTCTCTTCACTTTCTAGGGGAGACAGATTTCCTGAGGCCTTATGGTACTCAGCTACTAGAATCCTGTATTGAGCCTATGATCATCCATCATCCCAAAGGCCATACCATTCCAAGATTAGATCCAGAGAGTTTGAAGACCACCATGAGTTTCATCAAAAGAATAAAAGATGTGGTTGAAAATGAGCAATGA 660 0.447 MGSEGVKKPRILCLHGFRTSGHILKTQLHKWPQSVHDHLDLEFLDAPFPCQGKSDVEGIFDPPYYEWFQFNEEFTEYTNFDECVQYIEDYMIKHGPFDGLLGFSQGAVLSAALTGLQEKGEALTKVPRVKFIIIISGAKFKSSLITEKAYSSPITCPSLHFLGETDFLRPYGTQLLESCIEPMIIHHPKGHTIPRLDPESLKTTMSFIKRIKDVVENEQ* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3067 219 Pfam Serine hydrolase (FSH1) 7 198 IPR005645 -
Amo17g3067 219 PANTHER DIHYDROFOLATE REDUCTASE 6 218 - -
Amo17g3067 219 SUPERFAMILY alpha/beta-Hydrolases 7 203 IPR029058 -
Amo17g3067 219 PANTHER ESTERASE OVCA2 6 218 - -
Amo17g3067 219 Gene3D alpha/beta hydrolase 5 214 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3067 Amo-Chr17 134507601 134511328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3067 2 198 Sulfurtransferasese or Rhodanese AT1G09280 29.694 4.70e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3067 - - gmx:100500670 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3067 17 134507601 134511328 Amo17g3067 17 134507601 134511328 ECH
Amo17g3067 17 134507601 134511328 Amo07g1808 07 53297998 53317297 hybridization