Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3040 ATGATGGCCTACACAGGTTCAATGCAGTTGCCTCGTGAAATTAGGCTACACAGTAATAGTGGGATCTGTAGTTTCCATAATAATCCAATAGGTATTGGGCGATTACATTTGGTTACCATAAATATTTCACCACGCAGTTGGAAGCAGAATTCTTCAGCACGCCATCTTTTCAATAAAGTACACGCCCCAATAAGACATGTGCCTTCCAGATGTAAAGTTTTCATATGTAGGTCTGTCCTAATACCAGGTGGAGGGAGTGGGACTCCACTCATGAAATCTGCTGCTGTATTTTTAACAAGGTCGCAGGAGACTTTAAGTGGGAACCCTGTTTTGCTTCGATTGATCCCAGCACTTGGTATCATTGCCTTTGCTGTTTGTGGCCTTGAACCACTCATACGTCTTGGCAGAGTTCTTATTCTTCAAAGACCTGACAGTACTTGGAAGAAAAGTAGCTCCAGATATATCATGACATCTTACTTCCAGCCCTTGCTATTGTGGACTGGGGCAATGCTCATATGCAGGGCACTAGATCCACTTGTCCTACCATCTGAGGCTAGCCAGGCTGTGAAGCAACGGATGCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTTATTCAACAAGCACAAAAATTCTTTATGGAGGCAAATGACTCCAGTGATTCAAGAAATGTGGGATTTGACTTTGCTGGGAAAGCTGTATATACTGCTGTATGGGTTGCTGCAGTGTCACTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAGGTGGTTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTTGCAGGTCGCGAGATATTCACAAACTTCTTGTCGAGTATAATGATCCATGCAACTCGGCCGTTTATTATGAATGAGTGGATTCAAACGAAGATTGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTAGGATGGTGGTCACCAACAATTGTGAGAGGTGATGATCGGGAAGCAGTTCATATTCCCAATCATAAGTTCACTGTAAATGTTGTGAGAAATCTGACTCAGAAATCCCATTGGCGCATCAAGAGCTACATTGCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGGAAGGTTTTGGCCAAAAATCCTCAAGTAGAGCAACAAAAGTTGCATAGAAGGGTGTTTCTGGAGAATGTCAATCCGGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCACATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATTCTCTTGGATCTTCTTAGAGTTGTCACTCACCATCGAGCTCGGCTAGCCACTCCCATCCGTACAGTTCAGAAAATATACAGTGAGGCTGACTCGGAAAATATACCTTTTGGGGACACTATTTTCACTCGATCCAGAGCAGCAGGAAATCGCCCATACCTCCTTATAGAACCGCCATATAAAGTTAATGGTGAGGATAAACCTAAACCTTCAGCTCGTTCGACTCGTCCAAATGAGGAAAAAGATGCCAAAGTTGATGAAACCTTGATGTCTGACCCCAAAGGAGATGAGAATTCAGTGGTGACATCAACCACCTCACCTGGTGTAAGCTCCAAGGATAAATCCAAGACAGCTTCTGAAGCCCAGAGTCAGAATCTGGGTTCTAATGGTTCAGTTGAGAAGACCTCCAAAACCTTGCAGCCCAAAAAGGAAAATGCAAATGCAGGAAAGGGAGCAACAGTTCCCCTATCGAAAAACCTTGCACAAAGTGCTGTGCCCGAAACTTCTCCGGTGACTTCACATGAGTCTAGCAAGGGAGACACAACTTCTGCTAGTCCTTCACCGATGAAGCAAGATGAAGAGAAATCTGCTGTGTCCTCACCTTCAATTAGGCCTTCTTTGGAAGATAATATCCTCCTTGGTGTTGCTCTCGAAGGTTCAAAACGAACTCTACCAATCGAGGAAGAAATGACTCCCCTTCCTATCCCTGGAGAGTCGCAAGAATTTGCTGTCCAAAGGAATGGGAGTGGACCTCCTGCTACCAAGGATAAGAAGGATCCTAAGCAGAATGATTAG 2097 0.434 MMAYTGSMQLPREIRLHSNSGICSFHNNPIGIGRLHLVTINISPRSWKQNSSARHLFNKVHAPIRHVPSRCKVFICRSVLIPGGGSGTPLMKSAAVFLTRSQETLSGNPVLLRLIPALGIIAFAVCGLEPLIRLGRVLILQRPDSTWKKSSSRYIMTSYFQPLLLWTGAMLICRALDPLVLPSEASQAVKQRMLNFVRSLSTVISFAYCLSSFIQQAQKFFMEANDSSDSRNVGFDFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIMNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYIAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVTHHRARLATPIRTVQKIYSEADSENIPFGDTIFTRSRAAGNRPYLLIEPPYKVNGEDKPKPSARSTRPNEEKDAKVDETLMSDPKGDENSVVTSTTSPGVSSKDKSKTASEAQSQNLGSNGSVEKTSKTLQPKKENANAGKGATVPLSKNLAQSAVPETSPVTSHESSKGDTTSASPSPMKQDEEKSAVSSPSIRPSLEDNILLGVALEGSKRTLPIEEEMTPLPIPGESQEFAVQRNGSGPPATKDKKDPKQND* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3040 698 MobiDBLite consensus disorder prediction 590 640 - -
Amo17g3040 698 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 2 696 - -
Amo17g3040 698 MobiDBLite consensus disorder prediction 529 570 - -
Amo17g3040 698 Gene3D - 299 354 IPR023408 -
Amo17g3040 698 MobiDBLite consensus disorder prediction 496 527 - -
Amo17g3040 698 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 2 696 IPR045042 -
Amo17g3040 698 MobiDBLite consensus disorder prediction 492 698 - -
Amo17g3040 698 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Amo17g3040 698 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Amo17g3040 698 Gene3D - 193 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3040 Amo-Chr17 133531049 133537494 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3040 1 678 Mechanosensitive Ion Channel Family AT1G58200 53.835 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3040 K22047 - gmx:100796022 1098.57