Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2981 ATGGTGGTTAGGAAAGTAGGGAAGTACGAGATAGGGAGGACGATTGGGGAAGGAACCTTCGCGAAGGTGAAGTTCGCTCAGAACACTGAGACCGGTGAGAGCGTCGCCATGAAAGTTCTTGACCGCGCCACAATCATCAAGCACAGCATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTGAGGCATCCCTATGTTGTTCGCTTGCATGAGGTTCTAGCAAGCAGAACGAAGATTTATATCATATTGGAGTTCATTACAGGTGGTGAATTGTTCGATAAAATTATACATCATGGACGTCTTAGCGAGACTGAAGCTAGAAGATATTTCCAACAGCTTATTGATGGCGTAGATTATTGCCACAGCAAGGGAGTCTATCACAGAGATTTGAAGCCAGAGAATCTTTTACTTGATTCACAAGGCAATATAAAAATTTCAGATTTTGGTTTAAGCGCATTACCAGAACAGGGTGTGAGTCTCCTTCGGACAACTTGTGGCACTCCAAACTATGTAGCCCCCGAGGTACTCAGTCACAAGGGTTACAATGGTGCTGTGGCAGATGTTTGGTCCTGTGGGGTTATCCTCTATGTCCTATTGGCTGGATACCTTCCCTTTGATGAGCTTGATCTAACCACCTTATACAGTAAGATTAATAAAGCAGACTTTTCATGCCCTTCTTGGTTTCCTGTAGGGGCAAAATCATTGATATGTAGAATTTTGGACACAAATCCTGAAACGCGTATAACCATAGAACAAATAAGAAACGATGAATGGTTTCAGAGGGGCTACGTTCCAGTCAGCCTTCAGGAGCATGAAGATGTAAATCTGGATGACATAAATGCTGCTTTTGATGATGCCGAGGAAGAGAGAGATATTCGTCAAAGCCATAATGAGGACATGGGTCCCTTATTGCTTAATGCATTTGACTTGATCATTCTATCTCAAGGCTTAAACCTTGCATCAATGTTTGACAAGGGACAGGGCGCTCTTAAGCATCACACACGTTTTATATCTCAAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCCCAATCAATGGGATTTAAGACGCATATTCGCAACTTTAAGATGAGAATAGAGGGTGTCTCAGCAAATAAAACATCTTTTTTCTCGGTTATTCTGGAGTTGGATACTAGAAAGCAAACGGTCATCAAAGAAAAGACTTGGCTATTGTTGTTATTTGGACCACTCAAATTCCACACGTCTTGCTAA 1251 0.4229 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRATIIKHSMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIIHHGRLSETEARRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSLLRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLLAGYLPFDELDLTTLYSKINKADFSCPSWFPVGAKSLICRILDTNPETRITIEQIRNDEWFQRGYVPVSLQEHEDVNLDDINAAFDDAEEERDIRQSHNEDMGPLLLNAFDLIILSQGLNLASMFDKGQGALKHHTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNFKMRIEGVSANKTSFFSVILELDTRKQTVIKEKTWLLLLFGPLKFHTSC* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2981 416 Gene3D Kinase associated domain 1, KA1 306 398 - -
Amo17g2981 416 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2981 416 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2981 416 Gene3D Transferase(Phosphotransferase) domain 1 3 305 - -
Amo17g2981 416 PANTHER - 2 391 - -
Amo17g2981 416 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 391 - -
Amo17g2981 416 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2981 416 SUPERFAMILY Protein kinase-like (PK-like) 6 278 IPR011009 -
Amo17g2981 416 Pfam NAF domain 306 363 IPR004041 GO:0007165
Amo17g2981 416 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Amo17g2981 416 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Amo17g2981 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Amo17g2981 416 CDD CIPK_C 309 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2981 Amo-Chr17 132332230 132338420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2981 1 413 CBL-interacting serine-threonine protein kinases AT4G24400 77.885 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo17g2981 Pkinase 3.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2981 - - gmx:100785444 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2981 17 132332230 132338420 Amo17g2981 17 132332230 132338420 ECH