Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2962 CCGGACCCCCTCCCCCCAAACCAAAAGTCCAACACTCCCACTCATCTCCTCTCATCTCTTTCTCAAAAAATCAAAGTTGAAAGAACAGATGGAAACCCTAACGGACTAGCCGCGCACCCACCGCAACCACCGCAGCCCCACAACCCCGCGGAACCCACAGACACTGGATCTCCTCTGCTCGAGCGTGCTTTCTCTCTGTTCGCCGGTGTCGCACCGTGGAAGCTCCGTCGCCGTCGCAGGAGCTGTGTCGCCATCGTAGGAAGCTCCGTCACCGTCCTAGGAAGCTGTGTCGCCGTTGTAGGAAGCTCCCTCGCCGTCGCGTGGAAGCTCTGTGGCCATCACCGTCTCTCCTGTTCAAGCGCTCTCTCTCTCTGTGTTCGCCGGTGTGGCCGTGTCCTTTGTCGTCGCCGTCACTCCCCTTCCTCCTCGCTGCCGGGAAGCACTGCTGTGAGGAAGGAAATTTCAGATGAAACAGATCGCATAACTGGGAAGACGAAACAAATTTCTAACATTCCAATTCAACTCAGCATTTATTCGCCACATGTTGTAAACTTAACCCTTATAGATCTTCCTGGGTTGACAAAGGTTGCAGTAGGTAAACCTCAAAATAGGCCCGCTTGCTCCTCCTTCACCAACCGAATCTCCATTCAGTTTCCTCTTCGTCTCTGTTCGAAGTTGGAAGCCTTTGCACACTCTGCAACTTCAAGCGCATACTCTGCAATTTCAATGCTCACAAGAAGAAAAATCCTCAATTTATTCTCAACCCAATTCGCTTCTCACCAATTCAATGCAGTTTCGAAGTTGTCACGAGTTCCTTCGCACCCTTATTCTGAAATCCACAAAACCCTAAACCCCTTTAGGGTTTTTCTTTTGTGTGCATGGAATTCGACGCAGGCATCGAAATTTCCCGAATACGAGATGCCATCGGTGACGTGGGGTGTGATTCAAGGTCGCAAGGAGAAGCTGGTATCGCGGGTCATCGTATTCGACTTCCTCAGGGGTTTGGGAATYGTCCCTRACGAGTTGCAGGACCTTGAGCTACCTTCGACAGTTGAAGTCATGAGGGAGCGCGTGGAGTTCCTCCAGAAACTAGGGCTAACAATTGATGACATCAACGATTACCCTTTGATGTTGGGATGCAGTGTGAGGAAGAACATAATTCCTGTTTTGGGGTACTTGGAAAAAATTGGGATTTCAAGATCCAAACTTGGGGGATTCATTAAGAGCTACCCGCAGGTATTGCATGCTAGTGTGATTGTTGAGCTTGTCCCTGTTGTGAAGTTCCTTAGGGGACTTGATGTGGAGAGGGAGGATATTGGGTATGTGTTGCAGAAGTACCCTGAACTTCTAGGGTTCAAGCTTGAGGGTACTATGAGTACATCAGTGGCTTATCTTGTTAGTATTGGGGTTAATCCTAGGGATATTGGTCCCATGGTGACTCAGTATCCTTATTTTTTGGGGATGAGAGTTGGGACTRTGATCAAGCCTTTTATTGATTACTTAGTCTCTTTGGGACTGCCAAAGAAGATTTTGGCTAAGATGTTGGAGAAGAGGAWCTATTTGCTTGGATATGATCTTGAAGAGACTATCAAGCCAAATGTGGATTGTTTGATTAGCTTTGGGATAGGGAGGGAGTGTTTGCCTTCGGTTATTGCACAGTATCCTCAGATTCTTGGATTGCCCCTCAAAGCCAAGTTGTCTTCGCAGCAGTACTTCTTCAGTTTAAAGCTTAAGATTGATCCTGAAGGTTTTGCGCGAGTCGTGGAGAAGATGCCGCAGGTGGTTAGCCTTCACCAAAACGTGATCATGAAGCCGGTCGAGTTCCTCCTCGGAAGGGCTATAGCACTGCATGATGTGGCTAGCATGGTGGTCAAGTGTCCGCAGTTAGTAGCACTGAGAGTGGAGCTCATGAAGAACAGTTTTTACTTCTTTAAGAGTGAGATGGGAAGACCACTGAAAGAGCTTGTAGAGTTCCCTGAATACTTTACTTACAGTCTGGAGTCTAGGGTCAAACCAAGATACCAAAGGCTAAAGAGCAAGGGGATAAGGTGTTCATTGAATTGGATGCTGAATTGTAGTGACCAGAGATTTGAAGAGAGGTTGCAGGGTAATTATATTGAGACTGAAAGTAYAGGTCCGACATTTTTAATGGGTGGRAAATTGAACCTGCCAGCTCTCTCACGCCACTCTCGTCTCCGATGTGTCACTTCTTTCTTGGTCTGGCACTCACCGTTTTGGAATCAAGCTCGTCGCACTCTGTGTACTCACCATCTCAAGCTCAGACACCGCTTTTCTGGGCTCGCTTCGCGGGCGGCAGAACCACACGGAACCCAGTCACGCGCCTTCGCGTACGCTCGTCGTCGCCGGAAGCAGAGGCAGCAGGTCCCGGTGGGCTGGTCTTGTTCGTCTTCTTGCTTGGAGCCTCACCGTCAGCTTCCTTGGCGCAACCCGATTTGA 2457 0.4892 PDPLPPNQKSNTPTHLLSSLSQKIKVERTDGNPNGLAAHPPQPPQPHNPAEPTDTGSPLLERAFSLFAGVAPWKLRRRRRSCVAIVGSSVTVLGSCVAVVGSSLAVAWKLCGHHRLSCSSALSLCVRRCGRVLCRRRHSPSSSLPGSTAVRKEISDETDRITGKTKQISNIPIQLSIYSPHVVNLTLIDLPGLTKVAVGKPQNRPACSSFTNRISIQFPLRLCSKLEAFAHSATSSAYSAISMLTRRKILNLFSTQFASHQFNAVSKLSRVPSHPYSEIHKTLNPFRVFLLCAWNSTQASKFPEYEMPSVTWGVIQGRKEKLVSRVIVFDFLRGLGIVPXELQDLELPSTVEVMRERVEFLQKLGLTIDDINDYPLMLGCSVRKNIIPVLGYLEKIGISRSKLGGFIKSYPQVLHASVIVELVPVVKFLRGLDVEREDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTXIKPFIDYLVSLGLPKKILAKMLEKRXYLLGYDLEETIKPNVDCLISFGIGRECLPSVIAQYPQILGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIALHDVASMVVKCPQLVALRVELMKNSFYFFKSEMGRPLKELVEFPEYFTYSLESRVKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGNYIETESXGPTFLMGGKLNLPALSRHSRLRCVTSFLVWHSPFWNQARRTLCTHHLKLRHRFSGLASRAAEPHGTQSRAFAYARRRRKQRQQVPVGWSCSSSCLEPHRQLPWRNPI* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2962 818 Pfam Dynamin family 148 200 IPR045063 -
Amo17g2962 818 Gene3D Transcription termination factor 3, mitochondrial 354 491 IPR038538 -
Amo17g2962 818 Gene3D Transcription termination factor 3, mitochondrial 492 708 IPR038538 -
Amo17g2962 818 PANTHER EXPRESSED PROTEIN 290 731 - -
Amo17g2962 818 MobiDBLite consensus disorder prediction 1 57 - -
Amo17g2962 818 MobiDBLite consensus disorder prediction 9 28 - -
Amo17g2962 818 MobiDBLite consensus disorder prediction 37 51 - -
Amo17g2962 818 Pfam mTERF 390 698 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 200 IPR027417 -
Amo17g2962 818 Gene3D - 115 208 IPR027417 -
Amo17g2962 818 SMART dynamin_3 76 282 IPR001401 GO:0003924|GO:0005525
Amo17g2962 818 SMART mt_12 512 543 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 SMART mt_12 404 435 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 SMART mt_12 585 615 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 SMART mt_12 440 471 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 SMART mt_12 620 651 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 SMART mt_12 548 580 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 SMART mt_12 368 399 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 SMART mt_12 476 507 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 SMART mt_12 652 683 IPR003690 GO:0003690|GO:0006355
Amo17g2962 818 PANTHER CGI-12 PROTEIN-RELATED 290 731 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2962 Amo-Chr17 132011857 132022237 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo17g2962 mTERF 3.6e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2962 K15032 - gmx:100809590 794.653