Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2957 ATGGATCTTGGGGCGGTGGGTTTGGATGGGTTGGTGGGTGTGGGTGGTTCTATTGGGTGTTCAGATGGTGAGACAAAGCACAAGTGGTACGGATCTGGGTTGTTGAAGCAGGAGAGATCTGGCGGTGGCAACACAAACAACGAAGATGATGATGAATATTGGAGGAGCAACAAAGTGGCCAAGACTAGTATTAATGGCGAGAGGAACTCGTCATCAAGCTTGCTGAGATCCAATGCAAGTCTCTTCTCTGATGTTGGTGGCAACAACCAGCAGCAGCAACAAATGCTAAGTTTCTCTTCACCAAAGTCAGACACATTCCCATATCATTACCTTCCCTTATCAAGAAATACAGGTTGTCACAGTTGGGGAAGCAATAGCATGCATGGGAATGGGAATGGGAATGGGATTGGGATGAGAGGGGCATTCACTCCATCACAGTGGATGGAGCTAGAACAGCAGGCCCTGATCTACAAGTATATAACCGCTAATGTCCCTGTCCCATCTCATCTTCTTATTCCCATCAAGAAAGCCCTTCATTCTGCTGGCTTCTCTCACTTCTTCAGGCCCAGTGCAGTGGGCTGGGCTGGGTTCCATCTGGGCTTCTCTAACAGCACCGATCCCGAGCCAGGCAGGTGCCGGAGAACAGATGGCAAGAAATGGCGTTGCTCCCGAGATGCCGTTGTCGACCAGAAGTATTGTGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCACAATGGCCATGCCCTCACCGGGACAACCACCTCCACCACCACCAAGAATGTGGTGCCCGGAAACACTCCTCCTCCTTATTCTTCACCTCCTAATACCATCAGCAGGATGTTTATGACTACTACTACTACTACTAATAATAAGGAGAGTAATGGTAGTGAGAGAATCCCAGAAGCTGAAGATGCACTTCCAATGCTGCCACCAACTCTTGAGCTGAAACCAAAGGAGGAAAACCCCTTCATCATTCCCAAACACCAAATCCCATACCAACAGGAATCTTCAAGGAATGAGTTTGGTCTTGTCACTTCTGATTCCTTACTTAACCCTTCCCAGAAGAGCACCACAACCTTAACAGACAGGGAAACTGATTCCCATCATTCCCTCAGGCATTTCATCGACGACTGGCCCAAAACCCAGACCCACCACCGCTCTGCCTTGTCGTCGTGGCCGGAGTCGGAGAGGACCGAGCTCTCCATTTCCATCCCCATGACAACAACCTCCAATGACTTCATGTCGTCCACCTCCTCTCCCACCAATGACAAGCTCACTCTCTCACCCCTGCGTCTATCAAGGGAACTAGACCCGATTCAAATGGGTTTGGGAGTGGGAAACAATGCTTTAAGTGATTCATCAAACTCATCAAGGCAAGCTAACTGGATTCCAATCACTTGGGAGAGTTCAATGGGTGGTCCTCTTGGAGAAGTTCTGAATCTCAGCACTAACAACAACAATGGAAGTGATAATAATCAATGTGGCAAGAACAACAATTCGTCCTCAGCACTTAACCTCATGAGTGATGGGTGGGATAATACTAATAGCCCTCCATTAGGGTCTTCTCCAACTGGGGTTCTTCAGAAGACAGCCTTTGGATCTTTATCAAATAGCAGTGCTGGGAGCAGCCCAAGGGCAGAGAATAAAACACAAGAAGGTTCAAGCTTGTGCAATGATCTTCTAATGCCTGCATTGTAA 1719 0.4852 MDLGAVGLDGLVGVGGSIGCSDGETKHKWYGSGLLKQERSGGGNTNNEDDDEYWRSNKVAKTSINGERNSSSSLLRSNASLFSDVGGNNQQQQQMLSFSSPKSDTFPYHYLPLSRNTGCHSWGSNSMHGNGNGNGIGMRGAFTPSQWMELEQQALIYKYITANVPVPSHLLIPIKKALHSAGFSHFFRPSAVGWAGFHLGFSNSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGHNGHALTGTTTSTTTKNVVPGNTPPPYSSPPNTISRMFMTTTTTTNNKESNGSERIPEAEDALPMLPPTLELKPKEENPFIIPKHQIPYQQESSRNEFGLVTSDSLLNPSQKSTTTLTDRETDSHHSLRHFIDDWPKTQTHHRSALSSWPESERTELSISIPMTTTSNDFMSSTSSPTNDKLTLSPLRLSRELDPIQMGLGVGNNALSDSSNSSRQANWIPITWESSMGGPLGEVLNLSTNNNNGSDNNQCGKNNNSSSALNLMSDGWDNTNSPPLGSSPTGVLQKTAFGSLSNSSAGSSPRAENKTQEGSSLCNDLLMPAL* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2957 572 SMART QLQ_2 140 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Amo17g2957 572 MobiDBLite consensus disorder prediction 483 564 - -
Amo17g2957 572 MobiDBLite consensus disorder prediction 34 54 - -
Amo17g2957 572 ProSiteProfiles QLQ domain profile. 141 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Amo17g2957 572 MobiDBLite consensus disorder prediction 354 374 - -
Amo17g2957 572 MobiDBLite consensus disorder prediction 254 272 - -
Amo17g2957 572 MobiDBLite consensus disorder prediction 483 572 - -
Amo17g2957 572 Pfam WRC 207 249 IPR014977 -
Amo17g2957 572 PANTHER GROWTH-REGULATING FACTOR 9 21 559 - -
Amo17g2957 572 Pfam QLQ 141 174 IPR014978 GO:0005524|GO:0005634|GO:0006355
Amo17g2957 572 ProSiteProfiles WRC domain profile. 206 250 IPR014977 -
Amo17g2957 572 PANTHER - 21 559 IPR031137 GO:0005634|GO:0006351|GO:0032502
Amo17g2957 572 MobiDBLite consensus disorder prediction 240 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2957 Amo-Chr17 131912846 131915644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2957 31 540 GRF Transcription Factor Family AT2G22840 42.463 1.92e-96 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Amo17g2957 WRC 5.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2957 - - aprc:113865097 620.928