Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2952 ATGCTTGATGAGATTATAAACTATGTGCAATCATTGCAACAGCAGGTTGAGTTTTTGTCCATGAAACTTGCCACTGTGAACCCAGAGCTGAATTTGGACCTAGAGCGGATTCTCTCAAAAGATATTCTGCAATCACGAATTGGTGGATATAGTGGTGGTATAAGCTGCTCTCAAGCATTCCCTAGTTCCAGCTTCCAAGGAACACTAGTGCCCATGCCTACCACTTCAAATCAACTCCCTCCCTTGCCTCAGAGTGTGTTGGACCATGAATTCCAAAACTTGTATGGAATGAGCTATGATTCTAGTACAGCTCTTGGGAACATGGGGCACAATGGTAATTTGACATTTTGGTCTTTTGCAATGATTAATTAA 372 0.4194 MLDEIINYVQSLQQQVEFLSMKLATVNPELNLDLERILSKDILQSRIGGYSGGISCSQAFPSSSFQGTLVPMPTTSNQLPPLPQSVLDHEFQNLYGMSYDSSTALGNMGHNGNLTFWSFAMIN* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2952 123 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 114 - -
Amo17g2952 123 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 114 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2952 Amo-Chr17 131823730 131825901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2952 1 115 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 53.390 2.40e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2952 - - adu:107461155 222.631