Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2923 ATGGGGAGAAATAGGATGAAGAATCTGCTTAGGAAGCTGCACATCGGTGGTGGAGACGGCGGCGATGACGGTGACGGTGACGGTGGCGCTTCTCCTACTATGAACGAACTACCGAGTCGCAATCTGAGTGTTGCAGAGCATGAGCGTGAGCATGAGTTTCAATTTCAGATGAGAATGGCGTTGGCCATCAGTGCTTCCCATCCAATTCCAAACAATGACGCTGACTCCGATCAGATCGATGCCGCCAAGCAGATGAGCTTAGGTTCTGAGTCTTCCCTCACACAGTTCCAATCCCTTCGCTATTGGAATTATAGTGTGATAGGTTATGAGGAGAAAGTGATGGATGAGTTTTATGATGTTTATGGAATCTCTTCAAATATCATTCGTCGAGGAAAGATGCCCTTATTGGTGGATCTGCAGGCTAAAACCACCTCACAAAATGGTGATCGTGAAGTCATCTTGGTGAACCGCTTGGTTGATCTTGAGCTGCAGCGGCTTGAGGAAAAGGCCTGTGCCTTATTCAATGACTGTCCTATTTCTGAAAAAGGACTGATTTTAAGTGGCTTGCTGCAGAGACTTGCTGATATTGTTGTTACCAGAATGGGTGGCACAGTTGGTAGTGCAGATAAAATGATAGAAAGGTGGGCTAGGAGGAGTCATGAGTTAAGAGATTCTTCAAGAACCATTGTTCTTCCTCTTGGCTCTCTTGATGTTGGACTGTCGCGTCACCGAGCCCTGCTTTTTAAGGTACTTGCTGACAAGATTAATATTCCTTGCATGCTGGTCAAAGGGAGCTATTACACTGGAAGTGCTGATGGAGCATTGAATTTGATAAAAGCTGATGATGGAAGTGAATACATCATTGATATGATGGGTGCACCTGGGGTTCTTATTCCTGCTGAGGTGCCAAGCAGTCAGCTCCAAAACTATAGCTTTTCTGTAAGGAATTGTGAAGAAGTTGTCCGAGTGGGACTGTTTAACAGAACGCATTTGATGCTCGATAATAGAACTCAAGTCTTGGGTAGCTCACCTGATCAGTGCAGCAAAAAACCAAAAGCAGTCAAGTCCCAGTCAGAAAAACCATTAAATGTGGGTGGTCAAACAAAACTAGTTGATAATATCCATGTTGGAATGAATGAAAGAGAGAGGTTTGGACATAATTTGGGAAATCTTTTAGAGTCACTGCATAAATCATGTGAATTCTCATCACATAGAGAAACATCACCTGCAGAAAAGATTCGTGTAAACAATGTATCCAAGTATGTCCTCAGTGCAGCAAAGAACCCGGAATTCGCACAAAAACTACACACAGTTTTGCTAGAGAGTGGAGCCCTCCCCCCACATGATCTCTTTTCAGGTGTAAATCCACAAGATATGGGTGAAGATAAAACATGTGAAGAATTTGTCAGGGATATCATTCAAGATGATCCAACTAGGTTGTCATTAAGCTACAACAAATCTCTCATACCCTATCAAATGAAGCACACTGCCCATGATACTAGGTCAGAACAGCAGAAAGAATTTTACATAGATAGATATGATAATTCCACACAGTGTGATTGTGAATGTGATAATGCGGGGAAGGGGTCTGTGATGGTTTGTGACAATAGAGTTGATGGGTTAGAGAAATCTCATTACTTATGTAAAGAGCAATGTGTCCAATCTGACTTGCCCAAGACAGCTGTTTCTTGTGAAACACGTGATAGATTTGATGTTTCCCATGATGGGGATGACAAAAATGGTTATAATGAGGTTGGTGTAGCTTCAAATGACGTTGGATTTTGTAAAGACTCAGCCATTCAGATAAATAAGGCACCCTGTATAGACTCAGCAGAGTGTATCACATATGATCATAAGAATGACAGAGTTGACCCAGTCTTGAGGGAGAGGAAAGAATGGGAAATTCAATGGGAGGATCTTCGTATTGGTCAACGTATTGGTATCGGTTCGTGTGGTGAGGTTTTCCATGCTGATTGCAACGGTTCGGAAGTTGCTGTGAAGAAGTTTCTAACACAAGATTTTTCTAGTGATGCGGTGGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGACTGCGGCATCCCAATATTGTGCTCTTCATGGGAGCTATTACTCGTCCGCCACATCTATCCATCTTGACAGAGTTTCTTCCAAGAGGGAGTTTATATGGTCTATTGCGTAATCCTAAGTTTCAACTTAATGACAAGAGGCGGTTGCGTATGGCTGTTGATGTGGCTAAGGGAATGAACTACTTGCACACAAGTCATCCTCCCATTGTCCATAGAGATTTGAAGTCTCCGAATCTTCTTGTCTCCAAGCATTGGGTTCTTAAGGTCTGTGATTTTGGTCTATCGCGGATGAAGCACCATACATTTTTGTCATCAAAGTCCTATGCTGGAACGGCCGAGTGGATGGCACCAGAAGTCTTAAGAAACGAGCTTGCCAATGAAAAGTGTGATATATATAGTTTTGGAGTAATCTTGTGGGAGTTGGCTACGACAATGATCCCGTGGCAAGGTTTGAACCAAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAACAGGCGCCTTGAAATTCCAGATGATGTTGATCCAGAAGTAGAACAGATAATACGTGATTGTTGGCAAATGGATCCACAGTTACGGCCATCATTCTCCGAGTTATTATCTCGCCTCTGCCAACTTCAACATCTTGTTGTCGTTAAAGGTGTAAAACGAGCTCCACACATCAAATGA 2736 0.4291 MGRNRMKNLLRKLHIGGGDGGDDGDGDGGASPTMNELPSRNLSVAEHEREHEFQFQMRMALAISASHPIPNNDADSDQIDAAKQMSLGSESSLTQFQSLRYWNYSVIGYEEKVMDEFYDVYGISSNIIRRGKMPLLVDLQAKTTSQNGDREVILVNRLVDLELQRLEEKACALFNDCPISEKGLILSGLLQRLADIVVTRMGGTVGSADKMIERWARRSHELRDSSRTIVLPLGSLDVGLSRHRALLFKVLADKINIPCMLVKGSYYTGSADGALNLIKADDGSEYIIDMMGAPGVLIPAEVPSSQLQNYSFSVRNCEEVVRVGLFNRTHLMLDNRTQVLGSSPDQCSKKPKAVKSQSEKPLNVGGQTKLVDNIHVGMNERERFGHNLGNLLESLHKSCEFSSHRETSPAEKIRVNNVSKYVLSAAKNPEFAQKLHTVLLESGALPPHDLFSGVNPQDMGEDKTCEEFVRDIIQDDPTRLSLSYNKSLIPYQMKHTAHDTRSEQQKEFYIDRYDNSTQCDCECDNAGKGSVMVCDNRVDGLEKSHYLCKEQCVQSDLPKTAVSCETRDRFDVSHDGDDKNGYNEVGVASNDVGFCKDSAIQINKAPCIDSAECITYDHKNDRVDPVLRERKEWEIQWEDLRIGQRIGIGSCGEVFHADCNGSEVAVKKFLTQDFSSDAVAQFKSEVEIMLRLRHPNIVLFMGAITRPPHLSILTEFLPRGSLYGLLRNPKFQLNDKRRLRMAVDVAKGMNYLHTSHPPIVHRDLKSPNLLVSKHWVLKVCDFGLSRMKHHTFLSSKSYAGTAEWMAPEVLRNELANEKCDIYSFGVILWELATTMIPWQGLNQMQVVGAVGFQNRRLEIPDDVDPEVEQIIRDCWQMDPQLRPSFSELLSRLCQLQHLVVVKGVKRAPHIK* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2923 911 MobiDBLite consensus disorder prediction 13 37 - -
Amo17g2923 911 Pfam Ethylene-responsive protein kinase Le-CTR1 95 298 - -
Amo17g2923 911 PRINTS Tyrosine kinase catalytic domain signature 819 841 IPR001245 GO:0004672|GO:0006468
Amo17g2923 911 PRINTS Tyrosine kinase catalytic domain signature 714 727 IPR001245 GO:0004672|GO:0006468
Amo17g2923 911 PRINTS Tyrosine kinase catalytic domain signature 800 810 IPR001245 GO:0004672|GO:0006468
Amo17g2923 911 PRINTS Tyrosine kinase catalytic domain signature 753 771 IPR001245 GO:0004672|GO:0006468
Amo17g2923 911 PRINTS Tyrosine kinase catalytic domain signature 863 885 IPR001245 GO:0004672|GO:0006468
Amo17g2923 911 Pfam Protein tyrosine and serine/threonine kinase 640 892 IPR001245 GO:0004672|GO:0006468
Amo17g2923 911 Gene3D Transferase(Phosphotransferase) domain 1 719 902 - -
Amo17g2923 911 CDD STKc_MAP3K-like 646 892 - -
Amo17g2923 911 Gene3D Phosphorylase Kinase; domain 1 633 717 - -
Amo17g2923 911 SMART serkin_6 640 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2923 911 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 40 902 - -
Amo17g2923 911 MobiDBLite consensus disorder prediction 341 360 - -
Amo17g2923 911 PANTHER SERINE-THREONINE PROTEIN KINASE 40 902 - -
Amo17g2923 911 SUPERFAMILY Protein kinase-like (PK-like) 625 892 IPR011009 -
Amo17g2923 911 ProSiteProfiles Protein kinase domain profile. 640 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2923 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 759 771 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2923 Amo-Chr17 131461717 131470026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2923 26 898 MAP Kinase Kinase Kinase AT5G11850 51.181 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo17g2923 PK_Tyr_Ser-Thr 2.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2923 K04424 - gmx:100779137 1030.01