Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2914 ATGAGCGGTGAGGATGATGACCCAGAAAGAGCAAGATTGAGATTAAGAAGAGAACAAGAAAGATCGTCGTTGAATTCAAAGCTGGTGAACTTTCACCGTGATCTCATGGCTGGGGCGGTGATGGGTGGGGTGGTTCACACCATTGTGGCCCCTATTGAGAGGGCCAAGCTTCTTCTGCAGACGCAAGAGAGCAATTTGGCTATTGTTTCGAGCGGGCGTCGAAGATTCAAGGGCATGTTTGATTGCATACTCCGCACTGTTAGAGAAGAAGGCGTTCTCTCTTTGTGGCGTGGTAATGGCAGCAGTGTTCTTCGCTATTATCCTTCCGTTGCACTCAATTTCTCTCTCAAGGATCTATACAGGTGCATGTTAAGAGGTGGAAACTCTCATGACAGTACTATCTTCTCCGGTGCATCTGCCAATTTTGTCGCTGGTGCTGCGGCCGGTTGTACAGCACTTATCTTAGTCTACCCCCTTGACATTGCACATACCCGCCTTGCTGCTGACATCGGAAGGAAAGAGGCACGTCAGTTTCGTGGCATCTACCATTTCCTGGCTACCATATTCGAAAAGGACGGGATCCGGGGGATTTACAGGGGCCTTCCTGCATCCCTACAAGGGATGGTGGTCCACAGGGGCCTTTACTTTGGAGGCTTTGATACAATAAAAGAGATTCTATCCGAAGAAGAATCCAAGCCGGAGATTGCTCTGTGGAAGCGCTGGTTGGTAGCTCAGGCAGTCACAACCTCGGCAGGGTTGATATCTTACCCATTAGACACGGTCCGCAGGAGGATGATGATGCAGTCGGGGATGGAACGGCCGGTGTACCACAGCACCCTGGATTGCTGGAGGAAGATCTATAGGACAGAGGGGTTGGCTTCATTCTACCGCGGCACGGTTTCAAATGTGTTTAGAAGCACAGGTGCTGCAGCTATCTTAGTCTTGTATGATGAGGTTAAGAAATTCATGAATTGGGGGCGATTGTAA 987 0.4985 MSGEDDDPERARLRLRREQERSSLNSKLVNFHRDLMAGAVMGGVVHTIVAPIERAKLLLQTQESNLAIVSSGRRRFKGMFDCILRTVREEGVLSLWRGNGSSVLRYYPSVALNFSLKDLYRCMLRGGNSHDSTIFSGASANFVAGAAAGCTALILVYPLDIAHTRLAADIGRKEARQFRGIYHFLATIFEKDGIRGIYRGLPASLQGMVVHRGLYFGGFDTIKEILSEEESKPEIALWKRWLVAQAVTTSAGLISYPLDTVRRRMMMQSGMERPVYHSTLDCWRKIYRTEGLASFYRGTVSNVFRSTGAAAILVLYDEVKKFMNWGRL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2914 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 123 IPR018108 -
Amo17g2914 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 136 225 IPR018108 -
Amo17g2914 328 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Amo17g2914 328 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Amo17g2914 328 PRINTS Mitochondrial carrier protein signature 98 118 IPR002067 GO:0055085
Amo17g2914 328 PRINTS Mitochondrial carrier protein signature 151 169 IPR002067 GO:0055085
Amo17g2914 328 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Amo17g2914 328 PRINTS Mitochondrial carrier protein signature 244 266 IPR002067 GO:0055085
Amo17g2914 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 239 322 IPR018108 -
Amo17g2914 328 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 27 327 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo17g2914 328 Pfam Mitochondrial carrier protein 139 228 IPR018108 -
Amo17g2914 328 Pfam Mitochondrial carrier protein 235 324 IPR018108 -
Amo17g2914 328 Pfam Mitochondrial carrier protein 30 124 IPR018108 -
Amo17g2914 328 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 27 327 - -
Amo17g2914 328 Gene3D Mitochondrial carrier domain 33 325 IPR023395 -
Amo17g2914 328 PRINTS Adenine nucleotide translocator signature 31 43 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo17g2914 328 PRINTS Adenine nucleotide translocator signature 76 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo17g2914 328 PRINTS Adenine nucleotide translocator signature 109 121 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo17g2914 328 PRINTS Adenine nucleotide translocator signature 136 149 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo17g2914 328 PRINTS Adenine nucleotide translocator signature 240 256 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo17g2914 328 SUPERFAMILY Mitochondrial carrier 27 318 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2914 Amo-Chr17 131348650 131352656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2914 28 320 Antiporters AT5G13490 39.867 1.20e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2914 K05863 - gmx:100797251 528.48