Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2911 ATGGATTTGGAATGGTTGTTCCCAATAGACAGTAATTCTTCTTCATTAACAGCAATATTATTCACTGTGGTGGCGATCATGGGAGGGTTGCTGGCCTATTTGTATGGGCCATATTGGAAGGTAAGGCAGGTTCCAGGCCCACCAACATGGCCTCTGGTAGGACATCTTCATCTCATGGCTAAGTATGGTCCTGATTTGTTCACTCTCCTTGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAACCACTAATAATAATCGCAGATCCAGAGCTGTGTAGAGAGGTTGGAACAAGAAAGGCTAAAGAAATTCCAAACAGAAGCATGCCCTCCCCTGTTTCTGCTGCCCCTATTCACCAAAGGGGTCTCTTCTTCACCAAGGGTGAACAATGGTCTACTATGAGAAGCACTGTAACTTCCTTCTTCCACACGTCATTCATATCAAGTATGGTGCCAACAATGCAGTCATTCATAGAACCAGCAACCCAGATTCTTGATTCCCATGCAGAAGCACAAGAAGACATCAACTTCTCTAACTTCTCTCTCAGATTAGCAACCGATGTTGTTGGCCAAGCATCCTTTGGTGTCAACTTCGGCCTCTCCAAGCCTCATTCCACCAAGAATGATGCCGAAGATGGCGAAGATGAAGTGTCACAATTCATCAACCAACATATCTTCAACACCACACACCTCAAGATGGACTTGTCCGGTTCCTTATCCATCATAATTGGTCTGATTCTCCCAATTCTTCAGGAACCCTGCAGGCAGATTCTCAAGAGGATACCTGGCACCATGGACTGGAAAATTGAGCGTGGTAATCGTAGTCTAAGCGGCCGTATAGATAGGATTATAGAGAAGAGAATGGAAGAGAAGGGAAGAAGTTCAAAGGATTTCTTGTCAATTGTGCTGAGTGGAAGAGAAAGAAAACAGAACTACCTCACACCAGACTACATAAGCGCTCTTACATATGAACAGCTTCTTGCAGGGTCAACTACCACATCCTTTACCATGTCTTCCATTGTATACTTGGTTGCTGGGCATCCTCACGTTGAGAAAAAGCTTCTTCAAGAGATTGATGCTTTCGGTCCAAAGGACAAGATTCCCACTCCTCAGGATCTTAAGGAAAAGTTTCCTTATCTTGACCAGGTGATTAATGAGTCAATGAGGTATTACATGGCATCCCCATTAATTGCAAGGGAAGCATCAACTGATGTAGAGATTGGAGGTTACCTTCTTCCCAAGGGGACCTGGGTGTGGTTAGCCCTCGGAGCTCTATCAAAAGACCCAAAAAGCTTTCCGGAGCCAGAGAAGTTCAAACCAGAGAGGTTTGACCCAAATTGTGAAGAAATGAAAAGAAGGCATCCCTATGCTTTTATTCCATTTGGAATTGGTCCCCGGATTTGCATTGGCAAGCAATATGCTCAACAAGAGGTCAAGCTTACATTGATTCATTTATACCGCAGATACGTGTTTCGCCACTCACCTGACATGGAAATCCCCTTAGAACTCGACTATGGTCTTGTTCTCAATTTCAAGAATGGTGTCAAGGTCCGAGTTGTAAAACGAAACATTGATTAG 1587 0.4411 MDLEWLFPIDSNSSSLTAILFTVVAIMGGLLAYLYGPYWKVRQVPGPPTWPLVGHLHLMAKYGPDLFTLLAKQYGPIYRFHMGRQPLIIIADPELCREVGTRKAKEIPNRSMPSPVSAAPIHQRGLFFTKGEQWSTMRSTVTSFFHTSFISSMVPTMQSFIEPATQILDSHAEAQEDINFSNFSLRLATDVVGQASFGVNFGLSKPHSTKNDAEDGEDEVSQFINQHIFNTTHLKMDLSGSLSIIIGLILPILQEPCRQILKRIPGTMDWKIERGNRSLSGRIDRIIEKRMEEKGRSSKDFLSIVLSGRERKQNYLTPDYISALTYEQLLAGSTTTSFTMSSIVYLVAGHPHVEKKLLQEIDAFGPKDKIPTPQDLKEKFPYLDQVINESMRYYMASPLIAREASTDVEIGGYLLPKGTWVWLALGALSKDPKSFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRICIGKQYAQQEVKLTLIHLYRRYVFRHSPDMEIPLELDYGLVLNFKNGVKVRVVKRNID* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2911 528 SUPERFAMILY Cytochrome P450 38 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 525 - -
Amo17g2911 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Amo17g2911 528 Pfam Cytochrome P450 45 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 Gene3D Cytochrome P450 34 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g2911 528 PANTHER THROMBOXANE-A SYNTHASE 15 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2911 Amo-Chr17 131274236 131277814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2911 82 525 Cytochrome P450 AT2G26170 64.653 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2911 K20771 - gmx:100797803 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0902 08 15661370 15665669 Amo17g2911 17 131274236 131277814 hybridization
Amo16g4017 16 152316180 152322677 Amo17g2911 17 131274236 131277814 PCT
Amo17g2911 17 131274236 131277814 Amo16g4017 16 152316180 152322677 PCT