Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2900 ATGGATCTTGGGGCGGTGGGTTTGGATGGGTTGGTGGGTGTGGGTGGTTCTATTGGGTGTTCAGATGGTGAGACAAAGCACAAGTGGTACGGATCTGGGTTGTTGAAGCAGGAGAGATCTGGCGGTGGCAACACAAACAACGAAGATGATGATGAATATTGGAGGAGCAACAAAGTGGCCAAGACTAGTATTAATGGCGAGAGGAACTCGTCATCAAGCTTGCTGAGATCCAATGCAAGTCTCTTCTCTGATGTTGGTGGCAACAACCAGCAGCAGCAACAAATGCTAAGTTTCTCTTCACCAAAGTCAGACACATTCCCATATCATTACCTTCCCTTATCAAGAAATACAGGTTGTCACAGTTGGGGAAGCAATAGCATGCATGGGAATGGGAATGGGAATGGGATTGGGATGAGAGGGGCATTCACTCCATCACAGTGGATGGAGCTAGAACAGCAGGCCCTGATCTACAAGTATATAACCGCTAATGTCCCTGTCCCATCTCATCTTCTTATTCCCATCAAGAAAGCCCTTCATTCTGCTGGCTTCTCTCACTTCTTCAGGCCCAGTGCAGTGGGCTGGGCTGGGTTCCATCTGGGCTTCTCTAACAGCACCGATCCCGAGCCAGGCAGGTGCCGGAGAACAGATGGCAAGAAATGGCGTTGCTCCCGAGATGCCGTTGTCGACCAGAAGTATTGTGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCACAATGGCCATGCCCTCACCGGGACAACCACCTCCACCACCACCAAGAATGTGGTGCCCGGAAACACTCCTCCTCCTTATTCTTCACCTCCTAATACCATCAGCAGGTCATGTTCTTTCCATCTTATTCTATTCCAATATTGTGTTGATGGTGACTGGTCAATGCTAATAATAGTGGTTGAGATTCCTTTGAGGAAAGGAAGATGCTCTTAG 963 0.4933 MDLGAVGLDGLVGVGGSIGCSDGETKHKWYGSGLLKQERSGGGNTNNEDDDEYWRSNKVAKTSINGERNSSSSLLRSNASLFSDVGGNNQQQQQMLSFSSPKSDTFPYHYLPLSRNTGCHSWGSNSMHGNGNGNGIGMRGAFTPSQWMELEQQALIYKYITANVPVPSHLLIPIKKALHSAGFSHFFRPSAVGWAGFHLGFSNSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGHNGHALTGTTTSTTTKNVVPGNTPPPYSSPPNTISRSCSFHLILFQYCVDGDWSMLIIVVEIPLRKGRCS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2900 320 MobiDBLite consensus disorder prediction 254 272 - -
Amo17g2900 320 MobiDBLite consensus disorder prediction 240 281 - -
Amo17g2900 320 PANTHER - 21 268 IPR031137 GO:0005634|GO:0006351|GO:0032502
Amo17g2900 320 PANTHER GROWTH-REGULATING FACTOR 9 21 268 - -
Amo17g2900 320 ProSiteProfiles WRC domain profile. 206 250 IPR014977 -
Amo17g2900 320 SMART QLQ_2 140 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Amo17g2900 320 MobiDBLite consensus disorder prediction 34 54 - -
Amo17g2900 320 Pfam QLQ 141 174 IPR014978 GO:0005524|GO:0005634|GO:0006355
Amo17g2900 320 Pfam WRC 207 249 IPR014977 -
Amo17g2900 320 ProSiteProfiles QLQ domain profile. 141 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2900 Amo-Chr17 131167956 131169078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2900 1 254 GRF Transcription Factor Family AT2G22840 51.103 2.04e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Amo17g2900 WRC 2.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2900 - - gmx:100807080 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2900 17 131167956 131169078 Amo17g2900 17 131167956 131169078 ECH