Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2864 ATGCAATCAGGTGTGGGTGTGTGTTGCTCCTCTTCCTCCAATTGGTTGTTTGGGCTTGCAGCCGCAGCCGCCCCTCTTCTTCCCTCTTCTCTTACTACAATTTCGTTCCCAATTTCAAAGTCTTCTTCTTCTTCACTCATCACACTCTCCACTCCCTTACTAATTTCATCTCCTCTACGCTCCATTGCGAGTGCGAGTGGTTCGTCTCAGCTTAACGAAATGGCTTCCGATGATGCTCAAGATCCACGCTTACAGAGAATCTCCTCTGCGATCCGTGTCATCCCTGACTTCCCTAAGCCTGGAATTATGTTTCAGGACATAACCACGCTGCTGCTTGATACTAAGGCTTTTAAAGATACCATTGACTTGTTCGTTGAGAGGTACAGAGATCAAAACATTTCTGTTGTTGCAGGTGTTGAAGCAAGAGGATTTATATTTGGCCCACCTATTGCATTGGCTATTGGTGCAAAATTTGTCCCCATGAGGAAACCCAACAAGTTGCCAGGGGAGGTAATTTCAGAAGAGTATTCTCTTGAGTATGGAACTGACAAAATGGAGATGCATGTAGGAGCTGTACAACGTGGAGATCGAGCCTTAGTCATAGATGATCTTATTGCCACTGGGGGCACCTTATGTGCTGCAATTAAGCTACTAGAACGTGTTCAAGCACAAGTTGTTGAGTGTGCTTGTGTGATTGAATTGCCGGAGTTAAAGGGGCGAGATAAGCTTACCGGCAAGCCACTATTTGTCCTAGTTAAAGGAGCCTGA 768 0.457 MQSGVGVCCSSSSNWLFGLAAAAAPLLPSSLTTISFPISKSSSSSLITLSTPLLISSPLRSIASASGSSQLNEMASDDAQDPRLQRISSAIRVIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQRGDRALVIDDLIATGGTLCAAIKLLERVQAQVVECACVIELPELKGRDKLTGKPLFVLVKGA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2864 255 Pfam Phosphoribosyl transferase domain 113 239 IPR000836 -
Amo17g2864 255 SUPERFAMILY PRTase-like 89 247 IPR029057 -
Amo17g2864 255 CDD PRTases_typeI 121 253 IPR000836 -
Amo17g2864 255 Gene3D - 74 254 IPR029057 -
Amo17g2864 255 PANTHER ADENINE PHOSPHORIBOSYL TRANSFERASE, PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN-RELATED 78 253 - -
Amo17g2864 255 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 78 253 - -
Amo17g2864 255 TIGRFAM apt: adenine phosphoribosyltransferase 88 252 IPR005764 GO:0003999|GO:0005737|GO:0006168
Amo17g2864 255 Hamap Adenine phosphoribosyltransferase [apt]. 87 254 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2864 Amo-Chr17 130722982 130726419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2864 74 255 PRT Gene Family AT1G27450 80.220 2.46e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2864 K00759 - qsu:112027152 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2864 17 130722982 130726419 Amo17g2864 17 130722982 130726419 ECH
Amo08g0789 08 14009669 14013897 Amo17g2864 17 130722982 130726419 hybridization