Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2856 ATGACTTTTAGTTCTTGTGGTATCTGTACTTGGATTGTTCGTTCAATCTTTCAAGAACAATATTATTATTATTGGATAGGTGGAGGCTGTGGCGTTGGAGTAGGACTTGGTTGGGGGTTTGGTACTGCTTATGGTAGCAAGTATCGGTCATCACGGATCACATTTCAGGGAATGGAATTTGACAATAAGGTGGAGAAAGGCAACCCCAATGAGTTATCTAAAGCTAGCACAGAAATAAAAAGTTCTGGGGTTTTCCAACACAAATCCAAGAAAGCTTGTTGGCTTGTGATCAATGGCAGGGTATTGGGTGTCATGAAGTTCTTGGAGGAACGCCCTGGCGGCAAAGAGGTGTTGATGGAGTTAGCAGGCAAGGATGCAACGAAGGAGTTCGATGCAATTGGACACAGCAAAGGAGCACAGAACTTGGTCCTTAAGCACCAGGTGGGTGTCCTGCAAGGTGCCACCATAGAAGAGGTAGAAGCCAAGGACCATGTTGCGGATACGGAGTCCAAGAACAAAGAGATGAGTGCGTTCGTTATAAAAGAGGATCCCAAGTCCATGTCTGAGACACTTTACGAGTTCTTTGTTCCAGTTCTTGTTGGCACATTCTATTTTGGCTACCGATTACTTACCAGAGCAAACCCACACATTTAG 654 0.448 MTFSSCGICTWIVRSIFQEQYYYYWIGGGCGVGVGLGWGFGTAYGSKYRSSRITFQGMEFDNKVEKGNPNELSKASTEIKSSGVFQHKSKKACWLVINGRVLGVMKFLEERPGGKEVLMELAGKDATKEFDAIGHSKGAQNLVLKHQVGVLQGATIEEVEAKDHVADTESKNKEMSAFVIKEDPKSMSETLYEFFVPVLVGTFYFGYRLLTRANPHI* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2856 217 PANTHER CYTOCHROME B5 79 213 - -
Amo17g2856 217 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 76 152 IPR001199 -
Amo17g2856 217 SMART Cyt_b5_2 79 152 IPR001199 -
Amo17g2856 217 Gene3D - 70 158 IPR036400 -
Amo17g2856 217 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 79 157 IPR036400 -
Amo17g2856 217 Pfam Cytochrome b5-like Heme/Steroid binding domain 84 151 IPR001199 -
Amo17g2856 217 PRINTS Cytochrome B5 signature 111 125 IPR001199 -
Amo17g2856 217 PRINTS Cytochrome B5 signature 101 111 IPR001199 -
Amo17g2856 217 PRINTS Cytochrome B5 signature 139 151 IPR001199 -
Amo17g2856 217 PRINTS Cytochrome B5 signature 126 133 IPR001199 -
Amo17g2856 217 PANTHER CYTOCHROME B5-LIKE 79 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2856 Amo-Chr17 130647079 130649407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2856 82 212 NADPH P450 reductases AT5G48810 40.741 5.43e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2856 - - adu:107461195 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2856 17 130647079 130649407 Amo17g2856 17 130647079 130649407 ECH