Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2842 ATGTATGAATCTGGTTCGGAAGATATGGTTTTCTTCATATCCTATCGTCAGTTTGATTATTATTGTTCCTTAATTTGGAAAATTAAAGAAGCAATGGCTATCCAAGTCTTCGTCCTCTTCCTGCTGTTGCTCTCATCTTGTTTTGCGCCGGCAGCGGCCAAAGACACACTGTCACAAGGCTCCTCTCTTTCCGTCGAGAAGCCAACCACCGACATCCTCGTCTCCGCCAATGGTGACTTCTCCGCCGGATTCTTCCAAGTCGGCGACAACGCTTTCTGTTTCTCCGTCATGTTCACAAGGTCACAAACACCCACCCCAGTTTGGATGGCCAACCGCGACCAACCCGTCAACGGAAAATCCTCAACTCTCTCTCTCTTGAAATCCGGCAACCTTATTCTCATCGACGCCGGAAGAACCCCCTTCTGGTCCACCACCACATCCTCCTCTTCCGAAGTGCACCTCAAGCTCAACAATAACGGCAACCTCCTTCTCCAAACTTCACAAGGAACCGTCCTTTGGCAAAGCTTCGATTCACCAACGGACACCCTTCTTCCCGGTCAAAAACTAACTGATCAAGCTTTCCTTCTCTCTTCAAGAAGCACAACAAACTTCTCCTCAGGTTTCTACAAGCTCTTCTTCGACACCGACAACGTCCTCAAGTGTCTTTACAAAGGCCCTAACATCTCCAGCGTGTACTGGCCAACCCCCTATAACACAGCAAGTACTAACGGAAGATCCACCTTCAATATTTCAAGAATCGCAGTCTTAGATTCTTACGGAGCCATCTTATCCTCCGATGGCTTCCAATCCAACTCCACCGATTACCTCGCCAGACTCCACAGAAAGCTGGTCATGGATCCTGATGGAAACCCGCGTATATACAGCTTCAACCAGAATCGTAAGATGTGGGAGGTAACATGGCAAGCCATTAACGCAGCTTGTATGGTTCACGGCCTCTGCGGAGCAAATAGCTTGTGTGCTTATCATCCTGTTAATGGCAGAACTTGCTATTGCATGCAAGGATTCAAGGTTAAGGATCCCAATGACTGGACCCAAGGATGCGTCCCTGAGTTTGATGAAGAACAACTCAGTTGCAGTCGAAAAAAGAACGCATCCATAGATTTTGTGATTCTTCCAAGCACGGAGTTTTATGGTTATGAGAGCAAAGTTTACAACGTTGCAAGCTTGATACAATGCCGGAATATATGCACGCAACTTTGCGATAATTGCAAAGGTTTTCAACTCAGTTTCAATACCATTCGAGCCTATAATTGTTACCCTAAAACAGTGTTGCTTAACGGAAGAGATTCTCCTGATTTCAGTGCAGACACATATTTGAAATTGCCGAAAAAAGCTTTATTGTCTTCCAAGAAGCCTCTCAAACATTCACCAATGGAATGTTCTTCTCGTTTGTCTCAATCTTTGGATAGATTCTACCAGAAACCTAGAAGAAACTCCACGTTGAATTTCTTGCTCTGGTTCGCCAGCGCGGTAGGGGCGCTTGAATTGACAGCAATCTTGGCTGTGTGGTTCTTCTTGTTCAGAACCAACAAGCAACCTGATCATGAAGATCAACGGCTACTCCTTTCCGCTACGGGATTCCAGAGATTCAGCTATGCTGAGCTGAAAAGAGCGACAAAAGGATTCAGCCACAGCCATGAGATTGGTCGAGGCTCCGGAGGGGTTGTGTACAAAGGAAAACTAGACGATGATCGTTTTGCTGCCATCAAACGCCTCAGCAGCGACGCGAATCAAGGAGAAGCTGAATTCCTAGCCGAGTTAAGCACCATTGGGATGTTGAACCACATGAATTTGATTGACATGTGGGGTTACTGTGTTGAAGGGAAGCACAGGGTGTTGGTTTATGAGTACATGGAGCATGGTTCCTTGGCAGATTATCTGTCTTCAAACACGCTTGATTGGAAGAAAAGGTTTGATGTTGCAGTTGGAACTGCAAAAGGTCTTGCTTATTTGCACGAGGAGTGCTTGGAATGGGTGTTGCACTGCGATGTGAAGCCGCAGAACATTCTTCTAGACTCCAACTTCCAACCCAAGGTTGCGGATTTCGGGCTCTCAAAGCTTCTGAATAGAGACGAGCGTGGGAGTTCTGGGTTTTCAAGAATAAGAGGGACGCGTGGGTACATGGCTCCAGAGTGGGTTTACAATCTTCCAATAACTTCCAAGGTGGATGTTTATAGCTACGGGATTGTTGTGTTGGAAATGGTGACTGGGAAGAGCGCTATGGAGACTCATAGTCTTGATTTGAGTAGTCGCGGAATTGAGCAGCGGCGGTTGGTGACGTGGGTGAGTGACGTCATCAACGGTGCTCCCAAGACGGAGTTTTGGGTTGAGGCTATTGCGGATCCTAAATTGGAAGGCCAATATGAGACCTCGCAGGTTGAGGTTTTGGTCAAAGTGGCTTTGCAGTGTGTGCAAGATGACATGAATCAAAGACCCTCCATGAGCCAAGTGGCGGAGATGCTTCAGCCCCATGGAAAAACTCTCCTACTTTGTTAG 2517 0.4688 MYESGSEDMVFFISYRQFDYYCSLIWKIKEAMAIQVFVLFLLLLSSCFAPAAAKDTLSQGSSLSVEKPTTDILVSANGDFSAGFFQVGDNAFCFSVMFTRSQTPTPVWMANRDQPVNGKSSTLSLLKSGNLILIDAGRTPFWSTTTSSSSEVHLKLNNNGNLLLQTSQGTVLWQSFDSPTDTLLPGQKLTDQAFLLSSRSTTNFSSGFYKLFFDTDNVLKCLYKGPNISSVYWPTPYNTASTNGRSTFNISRIAVLDSYGAILSSDGFQSNSTDYLARLHRKLVMDPDGNPRIYSFNQNRKMWEVTWQAINAACMVHGLCGANSLCAYHPVNGRTCYCMQGFKVKDPNDWTQGCVPEFDEEQLSCSRKKNASIDFVILPSTEFYGYESKVYNVASLIQCRNICTQLCDNCKGFQLSFNTIRAYNCYPKTVLLNGRDSPDFSADTYLKLPKKALLSSKKPLKHSPMECSSRLSQSLDRFYQKPRRNSTLNFLLWFASAVGALELTAILAVWFFLFRTNKQPDHEDQRLLLSATGFQRFSYAELKRATKGFSHSHEIGRGSGGVVYKGKLDDDRFAAIKRLSSDANQGEAEFLAELSTIGMLNHMNLIDMWGYCVEGKHRVLVYEYMEHGSLADYLSSNTLDWKKRFDVAVGTAKGLAYLHEECLEWVLHCDVKPQNILLDSNFQPKVADFGLSKLLNRDERGSSGFSRIRGTRGYMAPEWVYNLPITSKVDVYSYGIVVLEMVTGKSAMETHSLDLSSRGIEQRRLVTWVSDVINGAPKTEFWVEAIADPKLEGQYETSQVEVLVKVALQCVQDDMNQRPSMSQVAEMLQPHGKTLLLC* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2842 838 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 32 829 - -
Amo17g2842 838 Gene3D Transferase(Phosphotransferase) domain 1 625 834 - -
Amo17g2842 838 Pfam Protein kinase domain 550 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2842 838 ProSiteProfiles Protein kinase domain profile. 549 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2842 838 Pfam S-locus glycoprotein domain 278 345 IPR000858 GO:0048544
Amo17g2842 838 SUPERFAMILY Protein kinase-like (PK-like) 525 828 IPR011009 -
Amo17g2842 838 ProSitePatterns Protein kinases ATP-binding region signature. 555 577 IPR017441 GO:0005524
Amo17g2842 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 92 236 IPR036426 -
Amo17g2842 838 Pfam D-mannose binding lectin 105 191 IPR001480 -
Amo17g2842 838 CDD STKc_IRAK 555 830 - -
Amo17g2842 838 Gene3D - 180 309 IPR036426 -
Amo17g2842 838 Gene3D - 50 178 IPR036426 -
Amo17g2842 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Amo17g2842 838 SMART serkin_6 549 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2842 838 Gene3D Phosphorylase Kinase; domain 1 513 624 - -
Amo17g2842 838 PIRSF SRK 27 836 IPR024171 GO:0004674
Amo17g2842 838 PANTHER OS07G0415500 PROTEIN 32 829 - -
Amo17g2842 838 ProSiteProfiles PAN/Apple domain profile. 365 449 IPR003609 -
Amo17g2842 838 ProSiteProfiles Bulb-type lectin domain profile. 48 177 IPR001480 -
Amo17g2842 838 SMART blect_4 62 179 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2842 Amo-Chr17 130454235 130457107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2842 476 830 Receptor kinase-like Gene Family AT3G58690 36.074 3.50e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo17g2842 Pkinase 2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2842 - - gmx:100816469 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2842 17 130454235 130457107 Amo17g2842 17 130454235 130457107 ECH