Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2831 ATGGCTAAAGTTGGTAAGACACGGTCCAAGTCCCAGRCTCAAGGTCGCAAGGAAACCCCATATKATTTATCTTGTGCACAAAAGAATATGAAAGATGTTCYTGGAAAGAAGAGCTCCACCAAATCATCAGAGAAGAAGGATTGGGAAGATGCAACTTGCTCTGTGTGTATGGAGGTCCCACACAATGCGATTCTTCTTCTTTGTTCYTCATATAACAAAGGTTGTCGCCCTTACATGTGTGCTACTAGTCATCGATATTCAAACTGTTTTGAGCAGTACAAGAAGGCCTACACAAAAGCAACTTCTGTTCAAAGTATGCAGCTAGCAATAGACAATTCAAATTTTGACTTAAGRGCAGGTGAACCTGATGACAATAGAGAAGTGCCTGAGCTTCTTTCCCCCTTTGCCGCAGACAGGTGA 420 0.4214 MAKVGKTRSKSQXQGRKETPYXLSCAQKNMKDVXGKKSSTKSSEKKDWEDATCSVCMEVPHNAILLLCSSYNKGCRPYMCATSHRYSNCFEQYKKAYTKATSVQSMQLAIDNSNFDLRAGEPDDNREVPELLSPFAADR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2831 139 PANTHER BNAC03G28140D PROTEIN 1 135 - -
Amo17g2831 139 MobiDBLite consensus disorder prediction 1 22 - -
Amo17g2831 139 PANTHER OS01G0612600 PROTEIN 1 135 - -
Amo17g2831 139 MobiDBLite consensus disorder prediction 116 139 - -
Amo17g2831 139 Pfam Protein of unknown function (DUF1644) 49 114 IPR012866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2831 Amo-Chr17 130275827 130276246 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2831 - - gmx:100812579 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0241 08 4016713 4021983 Amo17g2831 17 130275827 130276246 hybridization
Amo06g0951 06 13022753 13026333 Amo17g2831 17 130275827 130276246 PCT
Amo17g2831 17 130275827 130276246 Amo06g0951 06 13022753 13026333 PCT