Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2814 ATGGAAAAATTCCCATGGATACTTGTTTTGACAGTTGATTCTTCAATTGACTATGCTGAAACAACAGAATTGGACAGAGATGCTGATGAAGAACAGATAAAGAGCGCTTATCGACGATTGGCTAAATTCTATCATCCAGATGTCTATGATGGTAGAGGATCCCTTGAGGAAGGCGAAACAGCAGAAGCTAGGTTCATTAAGATCCAAGCTGCTTATGAATTGCTTATAGACGATGAGAAGCGAAGACGGTATGATATGGATAACCGAGTCAACCCTATGAAGGCGTCTGAGGCATGGATGGAGTGGCTAATGAAAAAGCGAAAAGCTTTTGATCAACGTGGTGATATGGCAGTTGCTGCTTGGGCTGAGCAGCAACAGCGAGAGTTGAATCTACGTTTCCGTCAACTTTCTCGTTCAAAGATGGATCCTGATGAGGCAAGGAAGATTCTAGCTAGAGAGAAGGCAGCTGCTGCTAAGAATTTCTCCAATACCCTTAAAAGGCACACACTTGTTCTCAAGAAAAGAGATTTGATGAGAAGAAAGGCAGAGCAAGATCAAGATAAACTTATCAGCCAGCTCTTGGCGGCAGAAGGTCTTGAATCAGATAGTGATGAATGA 618 0.4272 MEKFPWILVLTVDSSIDYAETTELDRDADEEQIKSAYRRLAKFYHPDVYDGRGSLEEGETAEARFIKIQAAYELLIDDEKRRRYDMDNRVNPMKASEAWMEWLMKKRKAFDQRGDMAVAAWAEQQQRELNLRFRQLSRSKMDPDEARKILAREKAAAAKNFSNTLKRHTLVLKKRDLMRRKAEQDQDKLISQLLAAEGLESDSDE* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2814 205 PANTHER LD30543P 23 204 - -
Amo17g2814 205 SUPERFAMILY Chaperone J-domain 7 86 IPR036869 -
Amo17g2814 205 PANTHER CO-CHAPERONE PROTEIN DJLA 23 204 - -
Amo17g2814 205 Pfam DnaJ domain 23 85 IPR001623 -
Amo17g2814 205 Gene3D DnaJ domain 8 92 IPR036869 -
Amo17g2814 205 ProSiteProfiles dnaJ domain profile. 17 88 IPR001623 -
Amo17g2814 205 CDD DnaJ 17 77 IPR001623 -
Amo17g2814 205 SMART dnaj_3 16 80 IPR001623 -
Amo17g2814 205 ProSitePatterns Nt-dnaJ domain signature. 65 84 IPR018253 -
Amo17g2814 205 PRINTS DnaJ domain signature 106 125 IPR001623 -
Amo17g2814 205 PRINTS DnaJ domain signature 19 37 IPR001623 -
Amo17g2814 205 PRINTS DnaJ domain signature 60 80 IPR001623 -
Amo17g2814 205 PRINTS DnaJ domain signature 37 52 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2814 Amo-Chr17 129907911 129910296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2814 - - ahf:112766429 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2814 17 129907911 129910296 Amo17g2814 17 129907911 129910296 ECH
Amo08g0747 08 13215293 13217828 Amo17g2814 17 129907911 129910296 hybridization