Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2788 ATGGCGGCTTCCGTTGATAACCGTCAATACCCAGCCCCAGGGCTCCAAGTCCAAACCCCTTTAAACGGCGTCGTACGCACTTTCAAGCCTTCGCATAACAATAATAATAACCGCTCTGATTCCCCCATTCGCGGTTATAACAAACTCCCGCAGAATTCGGACTTCACGCTCCCCAAGAAGTCACCTGACTCCCCGTTCAGCTTAGACAACGCGTGTTCAAGTGACGACGAAGACGACGAAAACGACGTCGCCGAACTCAAAACCCTCATTCACAAGGGAACCGCTGAATTGGAACCTTCAATCTACGACCCGCGCGACGATGGAACCTCCGACAGCTGGATCCAGCGCAACGCCTCCCTCGTCCGTCTCACCGGAAAGCACCCGTTTAACTCTGAGCCACCGCTACAACGCCTCATGCACCATGGCTTCATCACACCGGTCCCAATCCACTATGTACGTAACCACGGGCCTGTTCCCAAGGCACAATGGGAGGACTGGTCCGTAGAAGTATGCGGAATGGTAAAACGTCCCGCACACTTCACCATGGACCAGTTCCTCCACGATTTCCCAAGCCGCGAGTTCCCTGCAACGCTTGTTTGCGCAGGAAACCGGCGCAAGGAACAAAACATGGTGAAGCAGAGCATCGGGTTCAACTGGGGAGCGGCGGCGATTTCCACGTCGGTGTGGAGAGGTGTGCCGTTATGGAGTTTGTTYAAGCGGTGCGGGATCATGAGCAAAACGAAGGGCGCCCTCCACGTGTGCTTCGAGGGCGCTGAGGATCTGCCAGGTGGCGGTGGATCCAAATACGGAACGAGTATRCTGAGGGAGGTTGCACTGGATCCCTCCCGCGATATAATCCTGGCTTACATGCAAAACGGCGAGCGTTTAGCGCCAGATCACGGTTTCCCTYTTCGAATGATCATCCCCGGATTCATCGGTGGACGCATGGTTAAATGGTTGAAACGCATCATAGTTACACCGAAGCAATCTGACAGTTATTACCACTACAAAGATAACAGAGTACTCCCCTCTCATGTGGATGCTGAACTTGCCAATGCAGAAGCTTGGTGGTACAAGCCAGAGTATTTGATCAATGAGCTCAACATAAATTCTGTGATAACGACGCCGTGCCATGACGAGATTTTGCCGATAAACTCGTGGACTACTCAGAGGCCTTATGTACTCAGGGGATACGCATATTCTGGGGGTGGAAGAAAGGTGACACGTGTTGAGGTTACAATGGACGGTGGGGAGACGTGGCAAGTGTGCAGCTTAGAGCACCCAGAGAAGCCGAACAAGTACGGCAAATACTGGTGCTGGTGCTTCTGGTCGTTGGAGGTGGAGGTGCTCGACCTCCTTGGTTCCAAGGAAATTGCGGTGCGTGCTTGGGACGAGTCCCTCAACACCCAGCCGGAGAAGCTCATTTGGAATGTTATGGGCATGATGAACAACTGCTGGTTCAGGGTGAAAACCAACATGTGCAAGGCACACAGCAGGGGTGAAATAGGAATATCATTCGAGCACCCAACCCAACCGGGGAACCAATCCGGTGGGTGGATGGCGAAGGAGAGGCATCTGGAGAAATCTTCTGATACCACACCATCCCTCAAGAAGAGTATCTCCACACCCTTCATGAACACTTCCTCCAAGATGTTTTCCATCTCCGATGTCCGAAAGCACTGCACCGCTGAATCCGCATGGATCATCGTCCACGGCCACGTCTACGACTGCACTCGTTTCCTCAAGGACCATCCCGGCGGCATCGACAGCATCCTTATCAACGCCGGCACTGACTGTACCGAAGAGTTCGAAGCCATCCACTCCGACAAAGCCAAGAAAATGCTCGAAGATTACCGCGTCGGCGAGCTCATCAACACCGGCTACACCTCCTCCTCCGACTCCTCCCCTAACACCACTGTCCATGGAAACTCCGAAACCACTCACTTAGCTCCGATAAATGAAGTTKCGGTTCCGCCGGTMACACCGARCCGYAGCGRGGCACTCAACCCACGGGAGAAAATCCCATGCAAGCTGGTGTCCAAGAAATCCATTTCCAACGACGTTAGGCTCTTCCGTTTCGCATTGCCGTCGGAGGAWCAGCTCCTGGGCTTGCCAGTTGGCAAGCATGTTTTTGTGTGCGCAAACATTGACGGGAAGCTCTGCATGCGTGCGTACACTCCATCTAGCGACGTCGATGAAGTGGGACACTTTGATTTGGTYGTTAAGATTTATTTCAAGAACGTGCATCCTAAGTTCCCCAACGGAGGACTCATGTCACAACATTTGGACTCGCTTCCTATTGGTTCTTTCTTGGAAATTAAGGGTCCGTTGGGACACATAGAGTACACTGGCAAAGGAAACTTCACGGTTCACGGAAACCACCGGTTTGCAAAGAGGCTTGCCATGCTGGCTGGTGGGACCGGAATCACGCCKATTTACCAAGTTGRCCAAGCCATCCTGAAGGARCCTGAGGACCGAACCGAGATGCACGTGGTTTACGCGAACCGGAGCGAGGATGACATCTTGCTGAGGGAAGAGCTTGATGCGTGGGCCAAGAGCGATGAACGGTTCAAGATTTGGTACGTTGTGGAGAACCAAAGAGAAGGGTGGGAATACAGTGTGGGGTTCATCACGGAGAGTATCTTGAGGGAGCATCTTCCTCCTGCATCCGAAGATACTTTGGCTTTGACTTGTGGACCACCACCAATGATTAAGTTTGCAGTGCAGCCCAATTTGGAGAAGATGGGGTATGACATTAAGAACAACTTGCTATTATTTTAG 2781 0.5221 MAASVDNRQYPAPGLQVQTPLNGVVRTFKPSHNNNNNRSDSPIRGYNKLPQNSDFTLPKKSPDSPFSLDNACSSDDEDDENDVAELKTLIHKGTAELEPSIYDPRDDGTSDSWIQRNASLVRLTGKHPFNSEPPLQRLMHHGFITPVPIHYVRNHGPVPKAQWEDWSVEVCGMVKRPAHFTMDQFLHDFPSREFPATLVCAGNRRKEQNMVKQSIGFNWGAAAISTSVWRGVPLWSLFKRCGIMSKTKGALHVCFEGAEDLPGGGGSKYGTSXLREVALDPSRDIILAYMQNGERLAPDHGFPXRMIIPGFIGGRMVKWLKRIIVTPKQSDSYYHYKDNRVLPSHVDAELANAEAWWYKPEYLINELNINSVITTPCHDEILPINSWTTQRPYVLRGYAYSGGGRKVTRVEVTMDGGETWQVCSLEHPEKPNKYGKYWCWCFWSLEVEVLDLLGSKEIAVRAWDESLNTQPEKLIWNVMGMMNNCWFRVKTNMCKAHSRGEIGISFEHPTQPGNQSGGWMAKERHLEKSSDTTPSLKKSISTPFMNTSSKMFSISDVRKHCTAESAWIIVHGHVYDCTRFLKDHPGGIDSILINAGTDCTEEFEAIHSDKAKKMLEDYRVGELINTGYTSSSDSSPNTTVHGNSETTHLAPINEVXVPPVTPXRSXALNPREKIPCKLVSKKSISNDVRLFRFALPSEXQLLGLPVGKHVFVCANIDGKLCMRAYTPSSDVDEVGHFDLVVKIYFKNVHPKFPNGGLMSQHLDSLPIGSFLEIKGPLGHIEYTGKGNFTVHGNHRFAKRLAMLAGGTGITPIYQVXQAILKEPEDRTEMHVVYANRSEDDILLREELDAWAKSDERFKIWYVVENQREGWEYSVGFITESILREHLPPASEDTLALTCGPPPMIKFAVQPNLEKMGYDIKNNLLLF* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2788 926 MobiDBLite consensus disorder prediction 505 525 - -
Amo17g2788 926 CDD eukary_NR_Moco 106 491 - -
Amo17g2788 926 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 172 207 IPR022407 GO:0043546
Amo17g2788 926 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 547 627 IPR036400 -
Amo17g2788 926 Pfam Oxidoreductase molybdopterin binding domain 155 334 IPR000572 -
Amo17g2788 926 SMART Cyt_b5_2 552 624 IPR001199 -
Amo17g2788 926 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 104 364 IPR036374 -
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 280 296 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 461 473 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 474 487 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 313 326 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 222 237 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 436 446 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 409 421 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 364 376 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 297 310 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 143 159 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 121 135 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 196 207 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 207 219 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Eukaryotic molybdopterin domain signature 395 409 IPR008335 GO:0016491
Amo17g2788 926 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 839 850 IPR001709 GO:0016491
Amo17g2788 926 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 723 730 IPR001709 GO:0016491
Amo17g2788 926 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 870 886 IPR001709 GO:0016491
Amo17g2788 926 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 801 820 IPR001709 GO:0016491
Amo17g2788 926 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 583 593 IPR001709 GO:0016491
Amo17g2788 926 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 827 836 IPR001709 GO:0016491
Amo17g2788 926 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 894 902 IPR001709 GO:0016491
Amo17g2788 926 Pfam Mo-co oxidoreductase dimerisation domain 362 492 IPR005066 GO:0016491|GO:0030151
Amo17g2788 926 Gene3D Translation factors 663 777 - -
Amo17g2788 926 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 549 624 IPR001199 -
Amo17g2788 926 PANTHER NADH-CYTOCHROME B5 REDUCTASE 81 926 IPR001834 GO:0016491
Amo17g2788 926 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 771 920 IPR039261 -
Amo17g2788 926 MobiDBLite consensus disorder prediction 1 81 - -
Amo17g2788 926 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 671 783 IPR017927 GO:0016491
Amo17g2788 926 Gene3D - 778 926 IPR039261 -
Amo17g2788 926 Pfam Oxidoreductase NAD-binding domain 802 908 IPR001433 GO:0016491
Amo17g2788 926 Pfam Cytochrome b5-like Heme/Steroid binding domain 555 623 IPR001199 -
Amo17g2788 926 SUPERFAMILY E set domains 366 491 IPR014756 -
Amo17g2788 926 Gene3D - 366 541 - -
Amo17g2788 926 PIRSF Nitr_rd_NADH 29 925 IPR012137 GO:0006809|GO:0042128|GO:0050464
Amo17g2788 926 Gene3D - 105 356 IPR036374 -
Amo17g2788 926 PRINTS Cytochrome B5 signature 574 584 IPR001199 -
Amo17g2788 926 PRINTS Cytochrome B5 signature 611 623 IPR001199 -
Amo17g2788 926 PRINTS Cytochrome B5 signature 599 606 IPR001199 -
Amo17g2788 926 PRINTS Cytochrome B5 signature 584 598 IPR001199 -
Amo17g2788 926 SUPERFAMILY Riboflavin synthase domain-like 666 784 IPR017938 -
Amo17g2788 926 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 580 587 IPR018506 GO:0020037
Amo17g2788 926 Gene3D - 545 626 IPR036400 -
Amo17g2788 926 CDD cyt_b5_reduct_like 676 926 - -
Amo17g2788 926 Pfam Oxidoreductase FAD-binding domain 676 782 IPR008333 -
Amo17g2788 926 MobiDBLite consensus disorder prediction 11 60 - -
Amo17g2788 926 PRINTS Cytochrome B5 reductase signature 894 902 - -
Amo17g2788 926 PRINTS Cytochrome B5 reductase signature 723 730 - -
Amo17g2788 926 PRINTS Cytochrome B5 reductase signature 768 782 - -
Amo17g2788 926 PRINTS Cytochrome B5 reductase signature 801 820 - -
Amo17g2788 926 PRINTS Cytochrome B5 reductase signature 702 713 - -
Amo17g2788 926 PRINTS Cytochrome B5 reductase signature 839 850 - -
Amo17g2788 926 PANTHER NITRATE REDUCTASE 81 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2788 Amo-Chr17 129251131 129256160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2788 664 917 NADPH P450 reductases AT5G17770 40.078 2.64e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2788 K10534 - vvi:100264320 1499.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2788 17 129251131 129256160 Amo17g2788 17 129251131 129256160 ECH
Amo08g0723 08 12826247 12831191 Amo17g2788 17 129251131 129256160 hybridization