LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo17g2781	ATGGATGGGAAGGCTAACCTTCCGACCAACTCCGCCACTGGAACCGCAGCAGCCACCACCACCACTTCCACCTCCACCTCCACCGCTACCTCCTCTTCATTTTCCTCTTCTTCCAACTCTCCTACTGACTTCCTCCGCCATGTTCAAGCTGCCTTGAAGCGCCACCGCCCTCTCGGTTCAATGCAGTCCAATTGCATAAGGCCGAAGCGCTCAGTGCTTCCACAACAAAACTTGTCCGGAACTGCAACTGCTGCTGTGGATGTGAACAAGCCTTTAGATGTGTCGTCGAAGCAATTGCTTCCGCGCAGAATAAAGAAAGCAACTGCTGCAGCTGAAGGTCAAAACAACGCCTCTATCACGCCTCCTTTGATTTCAGGGACTTGCAACGATACCTATGATGGCGAAGGTTGTAACTCATTCAATGCGCATGTGCAACAACATCAGGGGAAGGGTGTTAACAATGCTGGTGTGGCTTCCCTGCTTGCAGGATCTTCCAATGTGGATGGTCTGAAGAAAGTTCAGTTTTCGATTGACACCAACACTAGCGTGCAGGGGGCCCATGTTGCAAAGGGCACTGAGTTGGAGAACTTGTCATCTTATATGAGTTCACTTGGATTGACAGAAATGGATTGGGTTGAAAGCAGCCAACATGATCCACCAGTTGGATTCAAGCAAGATTCGAATAATCAAAGGGTAGAATGTAACATGAATTTGAGATCCGAGGGAGGAATAAGTTCTATGTTGCCTAAGAGAACTACTGTTACTCAGGACAATCTCCAGCAGTTCAGAAACTTTTTAAGTCAGCCAGCAACTCAATCTTCAGTTGTGGGACCTTCTTGTGCTACAACTACCTCAGTCCATTCAACTTCTGCTCCCATGCTCAATTCAACAACTCGTTATTCTCATTTGCTTGTAGATAGTGGTTCATGTGTAACAGTGGAACCTATGGGGGAGATTAATGTTAATCCTAAAGCTGTAGCTGAAGGGGTTATTGAACCTCCAAATACTTCCCTGAAGGACATTAATAGAATGTCAATTGATAAGGCAGCAACAGCTGCCCAAGCTCCCCGTTCTGCTGATGCAGAGTTGGGACTTCAGGAGCACAACCAATCTAAGGAGCAACAGGGAGGCAAGGTAAAAGAAAATAGCATTTCAAAATATTCATCATGTCTTGACAATAAGTCAACTATAGCAAAAGAGCCTGCAGAGATTTCCAAACCACAATCCCAGGCTCCAGGTCCCCAAACTTCATGTTCAGATGTGAAGTCAGAGTCTTCTAACTTAGAAAAACGAGAGAAGGGTGCAAGTAGTAAAGMTCRAACATCTCGGAAAAGGACCTATGACCCTGATTTGTTTTTTAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGCAGTGGAGGAAGCAGCGAGGTACATAAGGTGATCTCTTCAGACTGTAAGATCTATGCACTTAAGAAGATCAAGCTCAAGGGTCGGGATTATGCTACAGCATATGGGTTTTGTCAAGAYATTGAGTATTTAAATAGGCTGAAAGGAAAGGATAACATTATACAGCTTATAGACTATGAGGTGACCGACAAAGCTTTGCTAGCAGAAGTCATGAAAGGATCCTTAAGTAARAAGGATGGGCGAGTCAAGGATGATGGATATATATACATGGTACTTGAATATGGGGAAATTGATTTGGCTCACATGTTGTCCCAGAAGTGGAAGGAACTGGATGGATGCAACCAGACRATTGATGAGAACTGGCTGCGATTTTATTGGCAGCAAATTCTTCAGGCTGTCAACACCATTCATGAGGAGCGTATTGTGCACTCTGATTTGAAGCCAGCCAACTTCCTCCTTGTCAYGGGTTCCCTGAAACTAATTGATTTTGGCATAGCCAAAGCAATAATGAGTGATACAACTAACATCCAACGGGAGTCACAGGTGGGAACTCTTAGTTACATGTCTCCAGAGGCATTTATGTGTAATGAGACCGATGCAAATGGAAACGTAATTAAGTGTGGACGGCCGTCAGATATCTGGTCCTTGGGCTGCATCCTTTATCAAATGGTATATGGGAGAACACCTTTTTCTGAATACAAGACATTTTGGGCAAAATTCAAAGTCATAACTGATCCAAACCATGAAATTACCTATGAACCTGTCCCAAACCCATGGCTTATGGATCTTATGAAGAAATGCCTTGCATGGGATCGCAATGAAAGGTGGAGAATCCCTCAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCAAGTATTCCATCTTTCTCCCAAGACCAAGGCTGTAAGTTGCTTCAGCTTATTGCTGAAACTTGTAAATATGACCCTGTAACATCCCAACTATGCTGTCAGCTCCAACAGGTCCTTGATGATCCCGCAAATTTGGTAACTCCTCAGTCATTAAATTCGCGAGATCAACAAGGAAAACTGCTATCCAGAGCATCAGAATTGTGTATTCAGCTGCAGGCACGTTTGGCAAATTCGGATAACAAGTAG	2517	0.4418	MDGKANLPTNSATGTAAATTTTSTSTSTATSSSFSSSSNSPTDFLRHVQAALKRHRPLGSMQSNCIRPKRSVLPQQNLSGTATAAVDVNKPLDVSSKQLLPRRIKKATAAAEGQNNASITPPLISGTCNDTYDGEGCNSFNAHVQQHQGKGVNNAGVASLLAGSSNVDGLKKVQFSIDTNTSVQGAHVAKGTELENLSSYMSSLGLTEMDWVESSQHDPPVGFKQDSNNQRVECNMNLRSEGGISSMLPKRTTVTQDNLQQFRNFLSQPATQSSVVGPSCATTTSVHSTSAPMLNSTTRYSHLLVDSGSCVTVEPMGEINVNPKAVAEGVIEPPNTSLKDINRMSIDKAATAAQAPRSADAELGLQEHNQSKEQQGGKVKENSISKYSSCLDNKSTIAKEPAEISKPQSQAPGPQTSCSDVKSESSNLEKREKGASSKXXTSRKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCKIYALKKIKLKGRDYATAYGFCQDIEYLNRLKGKDNIIQLIDYEVTDKALLAEVMKGSLSKKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVXGSLKLIDFGIAKAIMSDTTNIQRESQVGTLSYMSPEAFMCNETDANGNVIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVPNPWLMDLMKKCLAWDRNERWRIPQLLQHPFLVPPVPSIPSFSQDQGCKLLQLIAETCKYDPVTSQLCCQLQQVLDDPANLVTPQSLNSRDQQGKLLSRASELCIQLQARLANSDNK*	839

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo17g2781	838	Gene3D	Phosphorylase Kinase; domain 1	453	540	-	-
	Amo17g2781	838	MobiDBLite	consensus disorder prediction	1	42	-	-
	Amo17g2781	838	PANTHER	MIXED LINEAGE PROTEIN KINASE	24	802	-	-
	Amo17g2781	838	ProSiteProfiles	Protein kinase domain profile.	460	753	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo17g2781	838	ProSitePatterns	Protein kinases ATP-binding region signature.	466	488	IPR017441	GO:0005524
	Amo17g2781	838	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	607	619	IPR008271	GO:0004672\|GO:0006468
	Amo17g2781	838	SMART	serkin_6	460	753	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo17g2781	838	Pfam	Protein kinase domain	460	753	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo17g2781	838	SUPERFAMILY	Protein kinase-like (PK-like)	454	759	IPR011009	-
	Amo17g2781	838	Gene3D	Transferase(Phosphotransferase) domain 1	575	755	-	-
	Amo17g2781	838	MobiDBLite	consensus disorder prediction	364	385	-	-
	Amo17g2781	838	MobiDBLite	consensus disorder prediction	424	443	-	-
	Amo17g2781	838	MobiDBLite	consensus disorder prediction	408	423	-	-
	Amo17g2781	838	CDD	PKc_Mps1	458	753	-	-
	Amo17g2781	838	PANTHER	DUAL SPECIFICITY PROTEIN KINASE TTK	24	802	IPR027084	GO:0004712\|GO:0007093\|GO:0051304
	Amo17g2781	838	MobiDBLite	consensus disorder prediction	348	385	-	-
	Amo17g2781	838	MobiDBLite	consensus disorder prediction	398	443	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo17g2781	Amo-Chr17	129094818	129099006	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo17g2781	466	754	MAP Kinase Kinase Kinase	AT4G08470	29.352	7.77e-26	110

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TTK	Amo17g2781		Pkinase	1.5e-54	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo17g2781	K08866		-	gmx:100788990	1013.06