Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2778 ATGGATGGGAAGGCTAACCTTCCGACCAACTCCGCCACTGGAACCGCAGCAGCCACCACCACCACTTCCACCTCCACCTCCACCGCTACCTCCTCTTCATTTTCCTCTTCTTCCAACTCTCCTACTGACTTCCTCCGCCATGTTCAAGCTGCCTTGAAGCGCCACCGCCCTCTCGGTTCAATGCAGTCCAATTGCATAAGGCCGAAGCGCTCAGTGCTTCCGCAACAAAACTTGTCTGGAACTGCAACTGCTGCTGTGGATGTGAACAAGCCTTTAGATGTGTCGTCGAAGCAATTGCTTCCGCGCAGAATAAAGAAAGCAACTGCTGCAGCTGAAGGTCAAAACAGCGCCTCTATTACGCCTCCTTTGATTTCAGGGCCTTGCAACGATACCTATGATGGCGAAGGTTGTAACTCGTTCAATGCACATGTGCAACAACATCAGGGGAAGGGTGTTAACACTGCTGGTGTCCTGCTTGCAGGATCTTCAAATGTGGATGGTCTGAAGAAAGTTCAGTTTTCGATTGACACCAACACTAGCGTACAGGGGGCCCATGTTGCAAAGGGCACTGAGTTGGAGAACTTGTCATCTTATATGAGTTCACTTGGATTGACAGAAATGGATTGGGTTGAAAGCAGCCAACATGATCCACCAGTTGGATTCAAGCAAGATTCGAATCATCAAAGGGTAGAATGTAACATGAATTTGAGATCCGAGGGAGGAATAAGTTCTATGTTGCCTAAGAGAACTACTGTTACTCAGGACAATCTCCAGCAGTTCAGAAACTTTTTAAGTCAGCCAGCAACTCAATCTTCAGTTGTGGGACCTTCTTGTGCTACAACTACCTCAGTCCATTCAACTTCTGCTCCCATGCTCAATTCAACAACTCGTTATTCTCATTTGCTTGTAGATAGTGGTTCATGTGTAACAGTGGAACCTATGGGGGAGATTAATGTTAATCCTAAAGCTGTAGCTGAAGGGGTTATTGAACCTCCAAATACTTCCCTGAAGGACATTAATAGAATGTCAATTGATAAGGCAGCAACAGCTTCCCAAGCTCCCCGTTCTGCTGATGCAGAGTTGGGACTTCAGGAGCACAACCAATCTATGGAGCAACAGGGAGGCAAGGTAAAAGAAAATAACATTTCAAAATATTCGTCATGTCTTGACAATAAGTCAACTATAGCAAAAGAGCCTGCAGAGATTTCCAAACCACAATCCCAGGCTCCAGGTCCCCAAACTTCATGTTCAGATGTGAAGTCAGAGTCTTCTAACTTAGAAAAACGAGAGAAGGGTGCAAGTAGTAAAGGTCTAACATCTCGGAAAAGGACCTATGACCCTGATTTGTTTTTTAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGCAGTGGAGGAAGCAGCGAGGTACATAAGGTGATCTCTTCAGACTGTAAGATCTATGCACTTAAGAAGATCAAGCTCAAGGGTCGGGATTATGCTACAGCATATGGGTTTTGTCAAGAAATTGAGTATTTAAATAGGCTGAAAGGAAAGGATAACATTATACAGCTTATAGACTATGAGGTGACCGACAAAGCTTTGCTAGCAGAAGTCATGAAAGGATCCTTAAGTAACAAGGATGGGCGAGTCAAGGATGATGGATATATATACATGGTACTTGAATATGGGGAAATTGATTTGGCTCACATGTTGTCCCAGAAGTGGAAGGAACTGGATGGATGCAACCAGACTATTGATGAGAACTGGCTGCGATTTTATTGGCAGCAAATTCTTCAGGCTGTCAACACCATTCATGAGGAGCGTATTGTGCACTCTGATTTGAAGCCAGCCAACTTCCTCCTTGTCAAGGGTTCCCTGAAACTAATTGATTTTGGCATAGCCAAAGCAATAATGAGTGATACAACTAACATCCAACGGGAGTCACAGGTGGGAACTCTTAGTTACATGTCTCCAGAGGCATTTATGTGTAATGAGACCGATGCAAATGGAAACGTAATTAAGTGTGGACGGCCGTCAGATATCTGGTCCTTGGGCTGCATCCTTTATCAAATGGTATATGGGAGAACACCTTTTTCTGAATACAAGACATTTTGGGCAAAATTCAAAGTCATAACTGATCCAAACCATGAAATTACCTATGAACCTGTCCCAAACCCATGGCTTATGGATCTTATGAAGAAATGCCTTGCATGGGATCGCAATGAAAGGTGGAGAATCCCTCAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCAAGTATTCCATCTTTGTCCCAAGACCAAGGCTGTAAGTTGCTTCAGCTTATTGCTGAAACTTGTAAATATGACCCTGTAACATCCCAACTATGCTGTCAGCTCCAACAGGTCCTTGATGATCCCGCAAATTTGGTAACTCCTCAGTCATTAAATTCGCGAGATCAACAAGGAAAACTGCTATCCAGAGCATCAGAATTGTGTATTCAGCTGCAGGCACGTTTGGCAAATTCGGATAACAAGTAG 2511 0.4421 MDGKANLPTNSATGTAAATTTTSTSTSTATSSSFSSSSNSPTDFLRHVQAALKRHRPLGSMQSNCIRPKRSVLPQQNLSGTATAAVDVNKPLDVSSKQLLPRRIKKATAAAEGQNSASITPPLISGPCNDTYDGEGCNSFNAHVQQHQGKGVNTAGVLLAGSSNVDGLKKVQFSIDTNTSVQGAHVAKGTELENLSSYMSSLGLTEMDWVESSQHDPPVGFKQDSNHQRVECNMNLRSEGGISSMLPKRTTVTQDNLQQFRNFLSQPATQSSVVGPSCATTTSVHSTSAPMLNSTTRYSHLLVDSGSCVTVEPMGEINVNPKAVAEGVIEPPNTSLKDINRMSIDKAATASQAPRSADAELGLQEHNQSMEQQGGKVKENNISKYSSCLDNKSTIAKEPAEISKPQSQAPGPQTSCSDVKSESSNLEKREKGASSKGLTSRKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCKIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLAEVMKGSLSNKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRESQVGTLSYMSPEAFMCNETDANGNVIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVPNPWLMDLMKKCLAWDRNERWRIPQLLQHPFLVPPVPSIPSLSQDQGCKLLQLIAETCKYDPVTSQLCCQLQQVLDDPANLVTPQSLNSRDQQGKLLSRASELCIQLQARLANSDNK* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2778 836 MobiDBLite consensus disorder prediction 1 42 - -
Amo17g2778 836 Pfam Protein kinase domain 458 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2778 836 ProSiteProfiles Protein kinase domain profile. 458 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2778 836 ProSitePatterns Protein kinases ATP-binding region signature. 464 486 IPR017441 GO:0005524
Amo17g2778 836 Gene3D Transferase(Phosphotransferase) domain 1 573 753 - -
Amo17g2778 836 PANTHER MIXED LINEAGE PROTEIN KINASE 24 800 - -
Amo17g2778 836 MobiDBLite consensus disorder prediction 401 440 - -
Amo17g2778 836 MobiDBLite consensus disorder prediction 406 421 - -
Amo17g2778 836 Gene3D Phosphorylase Kinase; domain 1 451 538 - -
Amo17g2778 836 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 24 800 IPR027084 GO:0004712|GO:0007093|GO:0051304
Amo17g2778 836 CDD PKc_Mps1 456 751 - -
Amo17g2778 836 SUPERFAMILY Protein kinase-like (PK-like) 452 757 IPR011009 -
Amo17g2778 836 SMART serkin_6 458 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2778 836 MobiDBLite consensus disorder prediction 422 440 - -
Amo17g2778 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2778 Amo-Chr17 129046353 129050300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2778 464 752 MAP Kinase Kinase Kinase AT4G08470 29.352 8.71e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Amo17g2778 Pkinase 2.6e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2778 K08866 - gmx:100780144 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2778 17 129046353 129050300 Amo17g2778 17 129046353 129050300 ECH