Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2777 ATGAGCAAACCAAAACCTCTTAAACCAACAGTAACTAAGCATGTAAGCCACCACCACCAGAAGCCTCAGAAAACAGAAAAACAACCCTCTTGGGCAGTGGTAAGAGGCTTATTGTCTTGTAAAAATGTGCAGCTGGAAAAACCACGGCCACAGCAACAGAATCAGGAAAGTAGTAATAAAGAAGCAGTGAAGAAGAAACAGCAGGCACAAAGAAAGCTTCTTCAAGAGGAAGAGAACAACAACAGCAAGAAGTGCAAGAAGATGAAGTGTTCAGGCTCTCTATGCAACAACACCAAGATCACGGCGACGAGGCCGGAGACCGGAACACCGGATATTCACAAGAGAAGGATGATGACATCAATTACCAACAATGATGGTTCTTCAAGCAGATCCATGAAGGCACCTCTGAATGAACTCACCAACAACAATGGTGTTGTTTCTGCATCTTCTTCTTCACTCTCAGCATCTTCTACCTCCTCTGCCGGTGGTTCTTCCTTCAGGGGAATGCCATTCAGAAGACTCTCTGGTTGCTATGAGTGTAGAATGGTGGTAGATCCTGTTCTTGGTTTCACCAGAGACCCTTCTCTTAGAACCACCATTTGTTCATGCCCTGATTGTGGTGAAATCATGAAAGCTGAGAGCTTAGAGCATCATCAAGCTGTTAAACATGCAGTTTCTGAGCTTGGACCTGAGGATACAAGCAAGAACATAGTTGAGATCATATTCCATTCAAGCTGGCTAAAGAAGCAGACACCAGTGTGCAAGATCGATCGAATTCTCAAGGTTCATAACACTCAAAGGACTATAGGAAAATTTGAAGAGTACAGAGACTCCATTAAAGCAAAGGCTACAAAGCTCACAAAGAAACATGCTCGTTGCATAGCAGATGGAAATGAGTTACTCAGATTCCATTCCACAACCTTCTCATGCTCACTCGGCCTAAACGGTTCATCCAACCTCTGCAATTCAATACCTCTTTGCAATGTTTGCAGCATAATCAAGCATGGTTTCAAGGTCACAACCGGAGAAGCTGCCAGCGGCATTCTAACCACGGCCACAAGTGGAAGGGCTCATGACATGGCCGGATTGTCGCCGGCTGACGAAGGAAGCGAAAAGAGGGCAATGCTGGTTTGCAGGGTGATAGCAGGGAGAGTTAAGAAGAACAATGCAGAAGGTGGTAATAGTAATAGCAGCAGCAGCACCATGGATGAGTATGATTCAGTTGCAGGAGAAGTTGGAGCTTATTCCAACTTGGATGAGTTGTATGTGTCTAATCCAAGAGCTATATTGCCATGCTTTGTTGTAATCTATAGAGGGTTTTGA 1323 0.446 MSKPKPLKPTVTKHVSHHHQKPQKTEKQPSWAVVRGLLSCKNVQLEKPRPQQQNQESSNKEAVKKKQQAQRKLLQEEENNNSKKCKKMKCSGSLCNNTKITATRPETGTPDIHKRRMMTSITNNDGSSSRSMKAPLNELTNNNGVVSASSSSLSASSTSSAGGSSFRGMPFRRLSGCYECRMVVDPVLGFTRDPSLRTTICSCPDCGEIMKAESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQTPVCKIDRILKVHNTQRTIGKFEEYRDSIKAKATKLTKKHARCIADGNELLRFHSTTFSCSLGLNGSSNLCNSIPLCNVCSIIKHGFKVTTGEAASGILTTATSGRAHDMAGLSPADEGSEKRAMLVCRVIAGRVKKNNAEGGNSNSSSSTMDEYDSVAGEVGAYSNLDELYVSNPRAILPCFVVIYRGF* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2777 440 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 30 438 - -
Amo17g2777 440 Gene3D - 224 438 - -
Amo17g2777 440 MobiDBLite consensus disorder prediction 141 165 - -
Amo17g2777 440 MobiDBLite consensus disorder prediction 1 31 - -
Amo17g2777 440 SUPERFAMILY ADP-ribosylation 225 439 - -
Amo17g2777 440 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 30 438 - -
Amo17g2777 440 MobiDBLite consensus disorder prediction 59 85 - -
Amo17g2777 440 Coils Coil 52 86 - -
Amo17g2777 440 MobiDBLite consensus disorder prediction 44 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2777 Amo-Chr17 129032757 129034532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2777 166 438 C2H2 Transcription Factor Family AT1G75710 55.782 3.67e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2777 - - adu:107460803 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2777 17 129032757 129034532 Amo17g2777 17 129032757 129034532 ECH