Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2769 ATGAAACCTTCCATAATATTTTCCTCTCTTCTAATCATCTTCCTCATCTTCACTGCCACTGCCACCATCTCAGGCTACACCTTCAAGGCAATCACTCCAAATTTCAGTGCCACATACCTCCAATTCATTGATGACTCTGGAACCTTCTTAATATCTCCAAACGGAACATTCAAGGCTGCAATATTCAACCCGGGTTCCCAACAAACCAGCTTCTATCTCTGCATAATCCATGCTGCATCAAGAACCATCACTTGGTCCGCCAACCGCGGCCGCGCCATCTCGAGCTCCGGCCAGATGAATCTAACTGCTAAAGGGATAACAATTTCTGATGAAAGTGGAAGGAATAATCCTGTATGGTCAACTCCACCATTGAGATCACAAGTTGATAGGCTTGTCCTCACTGACATGGGTAACCTCCTACTCCTTGATCCTTCCAATGTTTCTCTTTGGGAAAGTTTTCGCTATCCAACCGACACAATTATCATCGGCCAGAGCTTACCTGTTGGATCATCTTTGTCAAGTTCTTCATCAGATTCAGACTTGTCCATTGGAAACTACAACCTCACAATCACTTCCTCTGATGCAATTCTCCAATGGCTTGGACAGACATATTGGAAACTTTCAATGGACACAAAGGCGTATAAGAATTCATTAAGCATGGTGGAGTACATGGCTGTGAACAGAACAGGCTTCTACCTATTTGGAAGTAATGGAACGGTTGCTGTGTTTCTGGTAGGCTTACCGGAGTCGAATTTTCGAGTAGCTACATTGGATAACTCTGGCCATTTTGTGATCAAAAGTTTTTCTTCCGGAACCGGTTGGAAGCAGGAATTTCAAGGGCCAGATGATGGTTGTGGAACTCCCTTAGTTTGTGGCAGAGTTGGTTTATGCAATGATGATGATACCTCTTCTTCATCTTCTTCTTCTTCATCATCATCATCACCTGTTTGTTCTTGTCCCCAGAATTTTCATGTAGGTTCAGGTAATTCTGGTGGTTGTGTTCCAAGCAACGGTTCTTACTCCTTTCCATATTCTTGTGATGTTTCTAATAATGATAGTTACCACAACAACAACAACCAATCAAATTCTGCTTCTTCCATTGTTTCATTCTTGAATCTTGGAAATGGTTTGGACTACTTTAACAATATCTACACCGATCCTGTTATGGACAGTGTGGATTTATCATTATGTCAAGACCAATGTTCCAAGAATTGTTCATGCTTGGGAGTCTTCTATAAAAACTCATCCGGTTCATGCTATGTGATTGAAAACGAGTTGGGGTCAATTTTGTCAAGTAACGATGGAGCCAATCAAGACATGTTTGGCTTCATCAAGGTTTCTATAGGATCCACAACCACCAATGATGATACGAGAGATGCTGAAGATGGCGGAGGAGGCTTTCCGGTGGTGGCCACAGTGTTGTTGCCGATCACAGGCTTCGCTCTCTTGATGGCCTTTCTTTTCTTCTTGTGGAGAAGATCTATTAAAATTTCCAAAAGAAAACAAGATTTGGAACTCGGAAAACCCAACAATAATCCTCATTCTTCCGGGGACCTTGATGCCTTCTACATCCCGGGTTTGCCTCGAAGATTCGACTACGACGAACTCAAAAAGGCCACCGATGATTTCAAGACTCTGATCGGCTCCGGTGGTTTTGGTACGGTGTACAAAGGAGTTCTCTCCGACAATGCCGTCGTGGCGGTCAAGAAAATAGTCAACATAGGAGTTCAAGGGAAGAAAGACTTTTGCACAGAGATTGCTGTCATTGGAAACATCCATCATGTCAATCTTGTCAAATTAAAAGGCTTTTGTGTCCAAGGGAGGCATCGGTTTTTGGTGTATGAGTACATGAATCTTGGTTCCCTCGACCGAACGTTGTTCGGTGGAGGGCCACCGTTGGAGTGGCAAGAGAGATATGACGTGGCATTGGGGACGGCGCGTGGTCTTGCCTACCTTCATGGTGGGTGTGAGCATAAAATTATTCACTGCGATATCAAACCTGAAAATATTCTTTTACATAATCATTTTCAAGTTAAGATATCGGATTTTGGATTATCAAAACTTTTAAGTCCTGAACAATCTGGATTGTTCACAACAATGCGAGGTACACGTGGATACCTCGCTCCAGAATGGCTCACAAATTCCGCCATCACAGAAAAAACTGATGTGTATAGTTACGGTATGGTTCTTCTCGAACTTATAAGCGGAAGAAAAAATTGTTATTTTAAATCAAGAAATCATAGTATAGACGAGGATAGTAATTCTTCGTCATCTTCGACGTCAGGATTGCTTTATTTCCCTTTGTTGGCATTGGAAAAGCATGAAGAAGGGAACTACATGGATCTTGCTGATCCGAGATTAGAAGGGCGCGTGACGAACGAAGAGGTGGAGAAGCTTGTGCGGATTGCGTTGTGCTGTGTTCATGAAGAACCGGCGTTGAGGCCGAACATGGCGGCGGTTGTTGGGATGTTGGAAGGTGGTATGGCATTGCCGCAACCAAAGATGGAGTCTTTGAACTTTTTAAGGTTTTATGGTCGTAGGTTTACGGAGGCTTCAATGATAATTGAGGAGAATAACGATAACGAAGGAGGAAGAAGAGAAGTGAATAATAATTCTTCAAGCATGACAAGTGGTGGCTCTCAAGCTGCTTTAGTTTCTTACATATCTTCACAGACTGTCTCAGGACCAAGATAG 2694 0.4298 MKPSIIFSSLLIIFLIFTATATISGYTFKAITPNFSATYLQFIDDSGTFLISPNGTFKAAIFNPGSQQTSFYLCIIHAASRTITWSANRGRAISSSGQMNLTAKGITISDESGRNNPVWSTPPLRSQVDRLVLTDMGNLLLLDPSNVSLWESFRYPTDTIIIGQSLPVGSSLSSSSSDSDLSIGNYNLTITSSDAILQWLGQTYWKLSMDTKAYKNSLSMVEYMAVNRTGFYLFGSNGTVAVFLVGLPESNFRVATLDNSGHFVIKSFSSGTGWKQEFQGPDDGCGTPLVCGRVGLCNDDDTSSSSSSSSSSSSPVCSCPQNFHVGSGNSGGCVPSNGSYSFPYSCDVSNNDSYHNNNNQSNSASSIVSFLNLGNGLDYFNNIYTDPVMDSVDLSLCQDQCSKNCSCLGVFYKNSSGSCYVIENELGSILSSNDGANQDMFGFIKVSIGSTTTNDDTRDAEDGGGGFPVVATVLLPITGFALLMAFLFFLWRRSIKISKRKQDLELGKPNNNPHSSGDLDAFYIPGLPRRFDYDELKKATDDFKTLIGSGGFGTVYKGVLSDNAVVAVKKIVNIGVQGKKDFCTEIAVIGNIHHVNLVKLKGFCVQGRHRFLVYEYMNLGSLDRTLFGGGPPLEWQERYDVALGTARGLAYLHGGCEHKIIHCDIKPENILLHNHFQVKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSYGMVLLELISGRKNCYFKSRNHSIDEDSNSSSSSTSGLLYFPLLALEKHEEGNYMDLADPRLEGRVTNEEVEKLVRIALCCVHEEPALRPNMAAVVGMLEGGMALPQPKMESLNFLRFYGRRFTEASMIIEENNDNEGGRREVNNNSSSMTSGGSQAALVSYISSQTVSGPR* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2769 897 Gene3D Phosphorylase Kinase; domain 1 520 616 - -
Amo17g2769 897 PIRSF SRK 3 881 IPR024171 GO:0004674
Amo17g2769 897 SUPERFAMILY Protein kinase-like (PK-like) 519 824 IPR011009 -
Amo17g2769 897 Gene3D - 41 154 IPR036426 -
Amo17g2769 897 Gene3D Transferase(Phosphotransferase) domain 1 617 835 - -
Amo17g2769 897 CDD B_lectin 46 156 IPR001480 -
Amo17g2769 897 Pfam Protein kinase domain 544 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2769 897 CDD STKc_IRAK 547 826 - -
Amo17g2769 897 SMART serkin_6 541 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2769 897 MobiDBLite consensus disorder prediction 865 881 - -
Amo17g2769 897 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 207 IPR036426 -
Amo17g2769 897 MobiDBLite consensus disorder prediction 857 881 - -
Amo17g2769 897 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 897 - -
Amo17g2769 897 ProSiteProfiles Bulb-type lectin domain profile. 34 154 IPR001480 -
Amo17g2769 897 SMART blect_4 41 156 IPR001480 -
Amo17g2769 897 Pfam D-mannose binding lectin 82 167 IPR001480 -
Amo17g2769 897 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 11 897 - -
Amo17g2769 897 ProSitePatterns Protein kinases ATP-binding region signature. 547 570 IPR017441 GO:0005524
Amo17g2769 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Amo17g2769 897 ProSiteProfiles Protein kinase domain profile. 541 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2769 Amo-Chr17 128946347 128949252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2769 524 833 Receptor kinase-like Gene Family AT5G20050 43.653 1.67e-76 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo17g2769 Pkinase 3.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2769 - - ahf:112766506 1640.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2769 17 128946347 128949252 Amo17g2769 17 128946347 128949252 ECH
Amo08g0705 08 12532194 12535001 Amo17g2769 17 128946347 128949252 hybridization