Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2750 ATGAGTTGTGTAATGATGAGTAAGGCAAAGCCATACCTATTAATGATAGGCTTGCAATTTGGTATGGCCGGAAATTACATCTTCGGCAAAGACATTCTTAATCATGGAATGAACCGTTTTGTGTTCATTGTGTATCGTAATGCCATGGCTGCTGCTGCACTTTCCCCTTTGGCCTTCATTTTTGAAAGGCCAGTTTTCAATCAAAGCTTCAATTACTTAGGAATGAAATATACTTCGGCTTCATTCACTTCTGCAATTATGAATGCCGTCCCATCCATTACCTTTCTTCTTGCACTTCTTACTCGGATGGAGCATGTAAAATTAAAAGAGGTTAGAAGTCAAGCCAAAGTGATTGGAACCTTAGTAACATTTGGAGGTGCTGTGTTAATGGGAATTTACAAAGGTCCTGGATTCAACCTTTTTCATTCTAGAACACAACAACATCATGGTGGTGGTGGAGACCCTTCCTCATCACACAACCACCACCAAATCGCCGGAGCTCTTTACATTTTCATGGGTTGTGTCGCCTTATCTTCTTTCTACATATTACAGTCGATCACCCTGAAGAAGTACCCGGCGGAGCTCTCATTGGCGACCTTAATATGTTTGGCGGGAACAGGGCAAGCTACGGTGGTTGCACTTGTAGCTGAGCATCACTCTCAAGCTTGGGCTCTTGGTTGGGACTACAGGCTCTATGCTCCTCTTTATACGGGATTGGTTAGCTCAGCAATTGCATACTATGTTCAAGGAATGGTTATGAAAATGAGAGGCCCTGTATTTACAACAGCTTTCAATCCTCTTTGTATGATTATTGTTGCTGCTTTGGGTTCCCTCTTTTTAGGAGAAAGACTTTATCTTGGAAGTATTATTGGAAGCATCATTATTACAATGGGCCTTTACTTGGTTGTGTGGGGCAAAGCCAAGGACCATAGAGAGGAAACAATAAATTTAAAATCACTTCCAATTACATGCGGCAAATTAGGGCTCATTTGGAGAAAAACAAAGCCATATCTATTAATGATTGGCTTGCAATTTGGTATGGCAGGAAATTACATCTTCGGCAAAGACGTGCTTAATCATGGGATGAGTCGTTTTGTGTTCATTTTCTATCGCAATGCCATGGCTACACTTGTGCTTGCTCCCTTTGCATTAATCATTGAAAGGCCAGTTCTCAACCAGAGCTTCGCYTATTTGGGAATGAAGTACACTTCTGCTTCATTCACATCTGCTATTACCAATGCAGCACCCTCCATCACCTTTGTACTTGCAGTTCTTACAGGGTTGGAGCGTGTAAAAATAAGAGAMGTAAGGAGTCAAGCAAAAGTGATTGGAACGTTAGTAACATTTGGAGGCGCAGTGGTAATGGCACTTTACAAGGGTCCTGGATTCAACTTTTTTCATTCTGCCGCAGCAACAACACAGAACAATGGAGATGCAGGACTCGCTTCACACAAACACCAAACTGTTGGKGCTCTTTACATTCTCATCGGTTGTGTGGCGTTGTCTTCTTTCTACATATTGCAGAGCATAACGGTGGCGAAGTATAGAGCAGAGTTATCATTGGCCACATGGATATGCATGGCAGGAACACTGCAAACTACAATAGTCGCACTTGTAGCAGAGCGTCACTCTGGTTCTAAGWCTTGGGCCATTGGTTGGGACATGAGGCTCTTTGCTCCTCTTTACACGGGAGTGGTTAGTTCAGGAATTGCATACTACATACAAGGATTGGTTATGAAAATGAGAGGTCCAGTGTTCACAACAGCTTTCAATCCTCTTTGCATGGTGATTGTTGCTGCTTTGGGTTCCTTCTTCTTACGAGAACGAGTCTATCTTGGAAGTATTATTGGAAGCATCATCATCACATTAGGACTTTACTCAGTTGTGTGGGGCAAAGCTAAGGATCACAAACACGAAGAAGCTGATGAGGACACAAATAAGTCATTGCCAATAACAACTACGGCTGCTGCAAATGATGATTCTTCAACWACTAACAAACCATCAAGTTAG 2010 0.4229 MSCVMMSKAKPYLLMIGLQFGMAGNYIFGKDILNHGMNRFVFIVYRNAMAAAALSPLAFIFERPVFNQSFNYLGMKYTSASFTSAIMNAVPSITFLLALLTRMEHVKLKEVRSQAKVIGTLVTFGGAVLMGIYKGPGFNLFHSRTQQHHGGGGDPSSSHNHHQIAGALYIFMGCVALSSFYILQSITLKKYPAELSLATLICLAGTGQATVVALVAEHHSQAWALGWDYRLYAPLYTGLVSSAIAYYVQGMVMKMRGPVFTTAFNPLCMIIVAALGSLFLGERLYLGSIIGSIIITMGLYLVVWGKAKDHREETINLKSLPITCGKLGLIWRKTKPYLLMIGLQFGMAGNYIFGKDVLNHGMSRFVFIFYRNAMATLVLAPFALIIERPVLNQSFAYLGMKYTSASFTSAITNAAPSITFVLAVLTGLERVKIRXVRSQAKVIGTLVTFGGAVVMALYKGPGFNFFHSAAATTQNNGDAGLASHKHQTVGALYILIGCVALSSFYILQSITVAKYRAELSLATWICMAGTLQTTIVALVAERHSGSKXWAIGWDMRLFAPLYTGVVSSGIAYYIQGLVMKMRGPVFTTAFNPLCMVIVAALGSFFLRERVYLGSIIGSIIITLGLYSVVWGKAKDHKHEEADEDTNKSLPITTTAAANDDSSTTNKPSS* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2750 669 MobiDBLite consensus disorder prediction 637 669 - -
Amo17g2750 669 MobiDBLite consensus disorder prediction 647 669 - -
Amo17g2750 669 PANTHER WAT1-RELATED PROTEIN 328 387 - -
Amo17g2750 669 PANTHER WAT1-RELATED PROTEIN 388 639 - -
Amo17g2750 669 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 308 - -
Amo17g2750 669 PANTHER WAT1-RELATED PROTEIN 7 62 - -
Amo17g2750 669 PANTHER WAT1-RELATED PROTEIN 61 314 - -
Amo17g2750 669 Pfam EamA-like transporter family 490 629 IPR000620 GO:0016020|GO:0016021
Amo17g2750 669 Pfam EamA-like transporter family 166 303 IPR000620 GO:0016020|GO:0016021
Amo17g2750 669 PANTHER WAT1-RELATED PROTEIN 328 387 IPR030184 GO:0016021|GO:0022857
Amo17g2750 669 PANTHER WAT1-RELATED PROTEIN 388 639 IPR030184 GO:0016021|GO:0022857
Amo17g2750 669 SUPERFAMILY Multidrug resistance efflux transporter EmrE 553 634 - -
Amo17g2750 669 SUPERFAMILY Multidrug resistance efflux transporter EmrE 370 460 - -
Amo17g2750 669 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 133 - -
Amo17g2750 669 PANTHER WAT1-RELATED PROTEIN 7 62 IPR030184 GO:0016021|GO:0022857
Amo17g2750 669 PANTHER WAT1-RELATED PROTEIN 61 314 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2750 Amo-Chr17 128576536 128584222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2750 332 660 Nodulin-like Gene Family AT2G37460 44.350 1.05e-100 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2750 - - ahf:112706078 520.005