Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2739 ATGGGTGCGTGGATGAGAAATGCAAAGCCGTATCTGCTTCTTGTGGCGGTGCAATTCGGTTCAGCGGGAATGTTCATATTTGCCATGGATGCAATTGCCAAAGGGATGAGCCATTACGTTTTCATTGTGTACCGTAATGCCATCGCCTCTGTTACTCTCGCTCCCTTTGCTTTTCTTCTTGAAAAGAAGGTTAGGCCAAAGATGACAGTGCGGGTATTTGTAGAGATAATGGCGTTGGCTTTCTTCGAGATTATACTTGATCAATGTTTCGCCCTGCTAGGGATGAAATACACATCGGCATCATTTCTATCAGCAGTGATGAATTCCGCACCTTCCATTACTTTTCTATTGGCGGTCATTCTTCGAATGGAGCGCATGAAGATTAAGGAGGTAGCATGCCAAGCAAAAGTGATTGGCACTGTGGTTACTTTTGGAGGCACCTTAGTTATGGCACTCTACAAAGGCACCGCAGTTACCATTTCAGTGGCAACCAAAGCGGCCCACCGGCCGGAGAACGTGAACAACCCTTCCAGCACCCACTGGGCAATAGGAACATGTTTTCTTATGATTGGTTGCATCGGCTTCTCTGCCTTTTACATATTGCAGGCCATAACGTTGCGCAAGTACCCAGCAGAGATGTCGCTCGCAACGTGGGTCTGCTTCGCCGGAGCACTTCAGAGCTCACTTGTGGCGGCTTTTGCCGAGCGCCACCGTCCTCATGCATGGGCTCTTGGTTGGGACATCAGACTCTTTGCTCCAGCTTACGCGGGAATAGTAACATCAGGAGTGCAATACTATATACAAGGGATGGTTAGCAAAGCAATGGGTCCAGTAATTGTAACTGCCTTTAATCCATTGCGTATGGTCATTGTTACCGCCTTGGCTTGCATCGTTCTCTCTGAGCAACTCTACCTCGGAAGTGTAATTGGGGCAATAGTGGTGGTTGGAGGACTATATGCAGTAGTGTGGGGAAAATATAAAGAGCAGAAAGCAAAGGAGAACTCTGAACAACAACAACAACAACTACCTGTCATTGCTCTCACAAATAATGATACTAATAACAAACCCCAATTTTTTGTCATTCAGCCTCATCATCAACAAATATCAAGCACAGAAAGCCAGACCAAATAA 1131 0.4642 MGAWMRNAKPYLLLVAVQFGSAGMFIFAMDAIAKGMSHYVFIVYRNAIASVTLAPFAFLLEKKVRPKMTVRVFVEIMALAFFEIILDQCFALLGMKYTSASFLSAVMNSAPSITFLLAVILRMERMKIKEVACQAKVIGTVVTFGGTLVMALYKGTAVTISVATKAAHRPENVNNPSSTHWAIGTCFLMIGCIGFSAFYILQAITLRKYPAEMSLATWVCFAGALQSSLVAAFAERHRPHAWALGWDIRLFAPAYAGIVTSGVQYYIQGMVSKAMGPVIVTAFNPLRMVIVTALACIVLSEQLYLGSVIGAIVVVGGLYAVVWGKYKEQKAKENSEQQQQQLPVIALTNNDTNNKPQFFVIQPHHQQISSTESQTK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2739 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 327 - -
Amo17g2739 376 PANTHER WAT1-RELATED PROTEIN 7 336 IPR030184 GO:0016021|GO:0022857
Amo17g2739 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
Amo17g2739 376 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Amo17g2739 376 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020|GO:0016021
Amo17g2739 376 PANTHER WAT1-RELATED PROTEIN 7 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2739 Amo-Chr17 128430571 128434987 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2739 5 354 Nodulin-like Gene Family AT2G37460 44.068 2.46e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2739 - - gmx:102665912 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2739 17 128430571 128434987 Amo17g2739 17 128430571 128434987 ECH
Amo08g0633 08 11224797 11229207 Amo17g2739 17 128430571 128434987 hybridization