Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2729 ATGCGGCGGAGCTTGAGCTGCCGGCGGCAAAAATATAAAAGAAGATTTGGAACATATGGGTACATTGCACCAGAGTTGGCTTATACAATGACTCTAACTGAAAACTGTGACGTCTATAGTTTTAGAGTGGTGGCATTGGAAACTTTAATGGGAAGGCACCTAAGAGAGCTAATCTCGTCTTCGTTAGATGACTCTTCTCACAAAAACACAATGGTAAAAGATCTCTTGGATCCACGCATCCGTTTACCATTAATAACAATGGCATTAACATGCTTGTGTTCTAATCCAAAGTCAAGACCATCAATGCAACAAAAAAAAAAGCGCGTAGAGCGCAATGAGATTGATCTTCAGAGGGCGCGTGTGACATTACAAGTTGGAACATATGGGTACCTTGCACCAGAGTTGGCTTATACAATGACTTTGACAAAAAACTGTCACGTCTATAGTTTTAGAGTGGTGGCATTGGAAACTTTAAGGGGAAGGCACCCAAGAGAGCTAATCTCGTCTTCGTTAGATGACTCTTCTAATAAAAACATAATGGTAAAAGATCTCTTGGATCCACGCATCCGTTTACCGTTAAGTCAAAAGAAACCCAAGCTATAG 603 0.4096 MRRSLSCRRQKYKRRFGTYGYIAPELAYTMTLTENCDVYSFRVVALETLMGRHLRELISSSLDDSSHKNTMVKDLLDPRIRLPLITMALTCLCSNPKSRPSMQQKKKRVERNEIDLQRARVTLQVGTYGYLAPELAYTMTLTKNCHVYSFRVVALETLRGRHPRELISSSLDDSSNKNIMVKDLLDPRIRLPLSQKKPKL* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2729 200 Gene3D Transferase(Phosphotransferase) domain 1 116 200 - -
Amo17g2729 200 Gene3D Transferase(Phosphotransferase) domain 1 2 115 - -
Amo17g2729 200 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 119 195 - -
Amo17g2729 200 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 16 109 - -
Amo17g2729 200 Coils Coil 102 122 - -
Amo17g2729 200 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2729 200 SUPERFAMILY Protein kinase-like (PK-like) 120 167 IPR011009 -
Amo17g2729 200 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 119 195 - -
Amo17g2729 200 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 16 109 - -
Amo17g2729 200 SUPERFAMILY Protein kinase-like (PK-like) 10 110 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2729 Amo-Chr17 128080445 128082401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2729 126 189 Receptor kinase-like Gene Family AT1G53420 36.364 4.40e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo17g2729 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2729 - - ahf:112752745 117.857