Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2724 ATGGCATCGGAGCTTCAATTGCCGCCTGGATTTCGATTCCATCCAACAGATGAAGAACTCGTGTTGCACTATCTCTGCCGTAAATGCACTTCACAACCGATTGCTGTTCCGATCATTGCCGAGATCGACCTTTATAAATATGATCCCTGGGACCTTCCTGGTATGGCWTCYTATGGTGAGAAGGAGTGGTATTTTTTTTCACCTAGAGATAGAAAATATCCGAATGGGTCTAGACCGAATCGGGCTGCAGGAACTGGTTACTGGAAGGCAACCGGAGCCGATAAGCCTATTGGACAACCCAAACCAGTTGGGATTAAGAAAGCTYTGGTCTTTTACTCTGGAAAGGCTCCCAAAGGAGATAAGACCAATTGGATTATGCACGAATATCGTCTTGCAGACGTAGATCGTTCTGTTCGCAAAAAGAATAGCCTCAGGCTGGATGACTGGGTGCTGTGTCGCATCTACAATAAGAAAGGATCAATCGAGAAGCAACAACCGAGCAGCGGCGTCAGTACCGTCGTGAACCAGARGGCCGAATCTTCGGAAGTCGAAGACAAGAAGCCCGATATAGTTCCACGTGGCGGCGGCGGGGGCGTACTTCCACCGCATCCTCCTACGGCTCAGGCTTCGGCAGGCGGCGTGACGACAGATTATATGTACTTCGACAACTCCGATTCRGTTCCGAAGCTTCACACGGACTCGAGTTGCTCGGAGCAGGTGGTGTCGCCGGAGTTTGCGAGCGAGGTTCAGAGCGAGCCAAAGTGGAACGAGTGGGATAAAAACCTCGAAAGTGCGTATAATTACCTCGATGCCACACTCACSAACGGTTTTGGGTTCCCGTTYCAGGGTAACAATCAGATGTCGCCGCTYCAGGATATGTTCATGAACCTTCCGAAACCGTTCTGA 906 0.4989 MASELQLPPGFRFHPTDEELVLHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALVFYSGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGSIEKQQPSSGVSTVVNQXAESSEVEDKKPDIVPRGGGGGVLPPHPPTAQASAGGVTTDYMYFDNSDSVPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWDKNLESAYNYLDATLTNGFGFPFQGNNQMSPLQDMFMNLPKPF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2724 301 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Amo17g2724 301 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Amo17g2724 301 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Amo17g2724 301 PANTHER NAC TRANSCRIPTION FACTOR 56 2 279 - -
Amo17g2724 301 MobiDBLite consensus disorder prediction 163 212 - -
Amo17g2724 301 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Amo17g2724 301 MobiDBLite consensus disorder prediction 163 179 - -
Amo17g2724 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2724 Amo-Chr17 128011140 128013669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2724 1 301 NAC Transcription Factor Family AT1G01720 68.387 2.21e-147 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo17g2724 NAM 1.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2724 - - gmx:732553 507.294