Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2719 ATGGCTTCTAAGATTTGTTGCGAGAACTTCAGTGTTACAAAAGACCCTGGGGTAAGCTTTGCTCGGATGGCACTTGAGAACTTGGATGGAAGATGTAATCAGTTAGAAAATATGGCCAATTTCTTACTTGGTGTTTCACTTTCTGCATACTCGAAATTGGCCATTTCTGATGCTGAGAGGGTTAAGAGACAATCTGAAGCACTTCATACCCTTGAAACTGCCTGCAAATTGAGCAGAATGGAAGACCCTGTTGTATTATACCATCTGAGTTTAGAATACGCTGAGCAACGGAAGTTGGATGCTACACTTCATTATGCTAAGTGCATTGTAAAACTTGAAGTTGGCTCTAATGTTAAAGGTTGGTTACTGTTATCTAGGGTATTATCCGCACAAAAGCGGTTCTTAGATGCCGAATCTATTATCAATGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGTGATTTGTTACGAACAAAGGCGAAACTTCAGATCGCTCAGGGCCAGTTAAAGAGTGCCATTGAGACATACACTCAGCTTCTTGCTGTTCTTCAAGTTCATAGTAAAAGTTTTGGTTCTCGGAATAAGCTATTTAAGCTTAGTAATTTGTCTTTCAAAAAAAATATTAAAAATATCTAA 639 0.3897 MASKICCENFSVTKDPGVSFARMALENLDGRCNQLENMANFLLGVSLSAYSKLAISDAERVKRQSEALHTLETACKLSRMEDPVVLYHLSLEYAEQRKLDATLHYAKCIVKLEVGSNVKGWLLLSRVLSAQKRFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLKSAIETYTQLLAVLQVHSKSFGSRNKLFKLSNLSFKKNIKNI* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2719 212 Gene3D Tetratricopeptide repeat domain 17 202 IPR011990 GO:0005515
Amo17g2719 212 SUPERFAMILY TPR-like 60 183 IPR011990 GO:0005515
Amo17g2719 212 PANTHER PROTEIN NPG1 1 199 IPR043376 -
Amo17g2719 212 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2719 Amo-Chr17 127922515 127923898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2719 1 203 Calmodulin-binding Proteins AT4G28600 53.695 4.76e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2719 K21843 - gmx:100800762 299.671