Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2718 ATGGATTCTTTACTCCCACTTTTGTGTGGGAGGGCATTTCAGAGAAGAGAAGTAGTTAGGGTTTTCAGACAACTGCAATCCCTGCCATTCTCATACCCTTCCTCTGCTGCAAATTTCCACCACCTACTTCCGCCGACGCGCCACGCCTCCGCCGCCGCCGCACCCTGCCTCGGCCTCGCCCTGCTTCCACCTCGCTCTGCTTCCGCCGCCGCGCCACGCCTCCCACGCTCAATAAGACAAGAGGTTTCTGCGGCCCTAAATCGCTCATCTGGTTCTCAGACGGTTCAATACTCGGTGGAACATGCTGAGAAGTTTGAGAAATTTGGCATGTCGCCTTCCAAAGGTGTTCTTTTCTTTGGCCCTCCGGGCTGCGGCAAAACCCTGTTTACAAAAGCAATTGCAAATGAATTCCAGGCCAACTTCATAAGCGTCAGGGACCTGCATTACTTCTGCAGTTGGCCTGGCATTCCAAAATCCCACGACAATCTGATAGATATCTGTCGGGAGCACAAAATTGGGGCAATTGGTAAATTTTAA 537 0.5196 MDSLLPLLCGRAFQRREVVRVFRQLQSLPFSYPSSAANFHHLLPPTRHASAAAAPCLGLALLPPRSASAAAPRLPRSIRQEVSAALNRSSGSQTVQYSVEHAEKFEKFGMSPSKGVLFFGPPGCGKTLFTKAIANEFQANFISVRDLHYFCSWPGIPKSHDNLIDICREHKIGAIGKF* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2718 178 Gene3D - 93 150 IPR027417 -
Amo17g2718 178 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D 93 163 - -
Amo17g2718 178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 145 IPR027417 -
Amo17g2718 178 Pfam ATPase family associated with various cellular activities (AAA) 116 148 IPR003959 GO:0005524|GO:0016887
Amo17g2718 178 PANTHER AAA-FAMILY ATPASE 93 163 - -
Amo17g2718 178 CDD AAA 112 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2718 Amo-Chr17 127920833 127922298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2718 93 155 Calmodulin-binding Proteins AT3G56690 39.683 2.34e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2718 K13525 - ahf:114925624 229.18